Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HTR1EP28566 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR1EP28566 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HTR1EP28566 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.06■□□□□ 0.32
HTR1EP28566 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR1EP28566 AL353719.1-201ENST00000566847 864 ntBASIC17.06■□□□□ 0.32
HTR1EP28566 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HTR1EP28566 AL023973.1-201ENST00000624619 620 ntBASIC17.06■□□□□ 0.32
HTR1EP28566 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HTR1EP28566 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR1EP28566 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
HTR1EP28566 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HTR1EP28566 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1EP28566 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR1EP28566 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR1EP28566 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
HTR1EP28566 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
HTR1EP28566 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR1EP28566 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HTR1EP28566 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
HTR1EP28566 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1EP28566 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR1EP28566 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1EP28566 KRT8P7-201ENST00000533003 1432 ntBASIC17.04■□□□□ 0.32
HTR1EP28566 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
HTR1EP28566 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR1EP28566 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HTR1EP28566 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR1EP28566 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HTR1EP28566 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR1EP28566 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.04■□□□□ 0.32
HTR1EP28566 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.04■□□□□ 0.32
HTR1EP28566 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.04■□□□□ 0.32
HTR1EP28566 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 VENTXP5-201ENST00000523979 775 ntBASIC17.04■□□□□ 0.32
HTR1EP28566 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR1EP28566 CROCCP2-202ENST00000412962 2773 ntBASIC17.04■□□□□ 0.32
HTR1EP28566 AC106820.2-201ENST00000563775 3264 ntBASIC17.04■□□□□ 0.32
HTR1EP28566 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.04■□□□□ 0.32
HTR1EP28566 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTR1EP28566 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms