Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP24386 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP24386 AL358472.4-201ENST00000633140 710 ntBASIC16.66■□□□□ 0.26
CHMP24386 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP24386 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHMP24386 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP24386 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP24386 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHMP24386 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 PCED1CP-201ENST00000419887 785 ntBASIC16.65■□□□□ 0.26
CHMP24386 VENTXP5-201ENST00000523979 775 ntBASIC16.65■□□□□ 0.26
CHMP24386 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP24386 AL136038.4-201ENST00000603606 1261 ntBASIC16.65■□□□□ 0.26
CHMP24386 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP24386 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP24386 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 SDHAP2-201ENST00000455183 2001 ntBASIC16.65■□□□□ 0.26
CHMP24386 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP24386 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHMP24386 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP24386 AL163051.1-201ENST00000569214 1512 ntBASIC16.65■□□□□ 0.26
CHMP24386 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP24386 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP24386 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 AL391807.1-203ENST00000604392 2365 ntBASIC16.64■□□□□ 0.25
CHMP24386 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP24386 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
CHMP24386 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 AC079602.3-201ENST00000623931 403 ntBASIC16.64■□□□□ 0.25
CHMP24386 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP24386 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
CHMP24386 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP24386 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 KRT18P55-202ENST00000578578 1546 ntBASIC16.64■□□□□ 0.25
CHMP24386 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 AC005332.1-201ENST00000577698 1310 ntBASIC16.64■□□□□ 0.25
CHMP24386 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP24386 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP24386 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP24386 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP24386 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHMP24386 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP24386 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP24386 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHMP24386 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP24386 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP24386 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms