Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 AC125634.1-201ENST00000438758 1403 ntBASIC17.95■□□□□ 0.46
XPAP23025 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.95■□□□□ 0.46
XPAP23025 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.94■□□□□ 0.46
XPAP23025 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 AL138831.2-201ENST00000606564 490 ntBASIC17.94■□□□□ 0.46
XPAP23025 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
XPAP23025 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
XPAP23025 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.94■□□□□ 0.46
XPAP23025 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.94■□□□□ 0.46
XPAP23025 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
XPAP23025 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
XPAP23025 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.93■□□□□ 0.46
XPAP23025 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
XPAP23025 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 MIR5100-201ENST00000579544 119 ntBASIC17.93■□□□□ 0.46
XPAP23025 RN7SL510P-201ENST00000581311 263 ntBASIC17.93■□□□□ 0.46
XPAP23025 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.93■□□□□ 0.46
XPAP23025 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.93■□□□□ 0.46
XPAP23025 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
XPAP23025 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.93■□□□□ 0.46
XPAP23025 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
XPAP23025 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.93■□□□□ 0.46
XPAP23025 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.93■□□□□ 0.46
XPAP23025 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
XPAP23025 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
XPAP23025 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.92■□□□□ 0.46
XPAP23025 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
XPAP23025 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.92■□□□□ 0.46
XPAP23025 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
XPAP23025 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.92■□□□□ 0.46
XPAP23025 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.92■□□□□ 0.46
XPAP23025 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms