Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP4AP20648 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP4AP20648 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP4AP20648 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP4AP20648 FLJ13224-201ENST00000313737 1514 ntBASIC19.71■□□□□ 0.75
ATP4AP20648 AC243591.1-201ENST00000452967 1364 ntBASIC19.71■□□□□ 0.75
ATP4AP20648 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP4AP20648 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP4AP20648 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP4AP20648 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATP4AP20648 BX640515.1-201ENST00000617215 977 ntBASIC19.71■□□□□ 0.75
ATP4AP20648 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP4AP20648 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP4AP20648 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP4AP20648 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP4AP20648 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP4AP20648 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 AC004817.3-201ENST00000602957 2129 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP4AP20648 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 AC079776.2-201ENST00000641154 1609 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ATP4AP20648 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 AL022342.1-201ENST00000400363 863 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 RPS2P1-201ENST00000434010 821 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 AC073648.2-201ENST00000510116 352 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.7■□□□□ 0.74
ATP4AP20648 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP4AP20648 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 AC019129.2-201ENST00000609837 1235 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ATP4AP20648 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP4AP20648 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP4AP20648 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 ABALON-201ENST00000629058 1903 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 KRT18P55-202ENST00000578578 1546 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 IL9RP2-201ENST00000423948 1312 ntBASIC19.7■□□□□ 0.74
ATP4AP20648 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP4AP20648 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP4AP20648 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATP4AP20648 AC138028.4-201ENST00000564984 1845 ntBASIC19.69■□□□□ 0.74
ATP4AP20648 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP4AP20648 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 AL353593.2-201ENST00000602529 1483 ntBASIC19.69■□□□□ 0.74
ATP4AP20648 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ATP4AP20648 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP4AP20648 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 AL590627.1-203ENST00000421194 1026 ntBASIC19.69■□□□□ 0.74
ATP4AP20648 AC103564.2-201ENST00000432853 1299 ntBASIC19.69■□□□□ 0.74
ATP4AP20648 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.69■□□□□ 0.74
ATP4AP20648 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
ATP4AP20648 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 AC073592.4-201ENST00000623827 446 ntBASIC19.69■□□□□ 0.74
ATP4AP20648 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP4AP20648 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATP4AP20648 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATP4AP20648 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP4AP20648 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATP4AP20648 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP4AP20648 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATP4AP20648 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP4AP20648 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP4AP20648 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP4AP20648 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP4AP20648 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP4AP20648 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP4AP20648 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms