Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.76■□□□□ 0.43
XRCC1P18887 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.76■□□□□ 0.43
XRCC1P18887 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.76■□□□□ 0.43
XRCC1P18887 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 IGHV3-41-201ENST00000613121 348 ntBASIC17.76■□□□□ 0.43
XRCC1P18887 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.76■□□□□ 0.43
XRCC1P18887 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
XRCC1P18887 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
XRCC1P18887 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
XRCC1P18887 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
XRCC1P18887 AC108860.2-201ENST00000562760 2183 ntBASIC17.76■□□□□ 0.43
XRCC1P18887 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC1P18887 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
XRCC1P18887 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
XRCC1P18887 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
XRCC1P18887 AC124067.4-201ENST00000519691 2379 ntBASIC17.75■□□□□ 0.43
XRCC1P18887 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
XRCC1P18887 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.75■□□□□ 0.43
XRCC1P18887 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.75■□□□□ 0.43
XRCC1P18887 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.75■□□□□ 0.43
XRCC1P18887 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.75■□□□□ 0.43
XRCC1P18887 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 GUSBP12-201ENST00000513727 720 ntBASIC17.75■□□□□ 0.43
XRCC1P18887 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
XRCC1P18887 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.75■□□□□ 0.43
XRCC1P18887 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.75■□□□□ 0.43
XRCC1P18887 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.75■□□□□ 0.43
XRCC1P18887 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 AC084018.2-201ENST00000613093 2607 ntBASIC17.75■□□□□ 0.43
XRCC1P18887 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC1P18887 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
XRCC1P18887 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
XRCC1P18887 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.74■□□□□ 0.43
XRCC1P18887 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 AL024508.2-201ENST00000607749 1894 ntBASIC17.74■□□□□ 0.43
XRCC1P18887 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.74■□□□□ 0.43
XRCC1P18887 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.74■□□□□ 0.43
XRCC1P18887 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.74■□□□□ 0.43
XRCC1P18887 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.74■□□□□ 0.43
XRCC1P18887 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 TPSP2-201ENST00000561760 610 ntBASIC17.74■□□□□ 0.43
XRCC1P18887 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
XRCC1P18887 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
XRCC1P18887 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.74■□□□□ 0.43
XRCC1P18887 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.74■□□□□ 0.43
XRCC1P18887 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.74■□□□□ 0.43
XRCC1P18887 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
XRCC1P18887 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC1P18887 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms