Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TIMP2P16035 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP2P16035 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMP2P16035 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP2P16035 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP2P16035 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TIMP2P16035 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP2P16035 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP2P16035 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP2P16035 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMP2P16035 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TIMP2P16035 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.71■□□□□ 0.43
TIMP2P16035 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 AL390961.4-201ENST00000623958 2535 ntBASIC17.71■□□□□ 0.43
TIMP2P16035 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP2P16035 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.71■□□□□ 0.43
TIMP2P16035 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TIMP2P16035 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TIMP2P16035 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP2P16035 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP2P16035 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMP2P16035 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.71■□□□□ 0.43
TIMP2P16035 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMP2P16035 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP2P16035 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TIMP2P16035 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMP2P16035 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP2P16035 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP2P16035 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TIMP2P16035 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.71■□□□□ 0.42
TIMP2P16035 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP2P16035 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
TIMP2P16035 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP2P16035 SART3-203ENST00000546611 1184 ntBASIC17.7■□□□□ 0.42
TIMP2P16035 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP2P16035 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP2P16035 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 NKAPP1-205ENST00000585790 367 ntBASIC17.7■□□□□ 0.42
TIMP2P16035 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 AC019129.2-201ENST00000609837 1235 ntBASIC17.7■□□□□ 0.42
TIMP2P16035 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 AL356309.3-201ENST00000624132 1934 ntBASIC17.7■□□□□ 0.42
TIMP2P16035 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP2P16035 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP2P16035 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP2P16035 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TIMP2P16035 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TIMP2P16035 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.69■□□□□ 0.42
TIMP2P16035 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMP2P16035 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.69■□□□□ 0.42
TIMP2P16035 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.69■□□□□ 0.42
TIMP2P16035 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.69■□□□□ 0.42
TIMP2P16035 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.69■□□□□ 0.42
TIMP2P16035 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 SCARNA2-201ENST00000458748 420 ntBASIC17.69■□□□□ 0.42
TIMP2P16035 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.69■□□□□ 0.42
TIMP2P16035 RNPS1P1-201ENST00000507437 918 ntBASIC17.69■□□□□ 0.42
TIMP2P16035 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMP2P16035 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMP2P16035 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.69■□□□□ 0.42
TIMP2P16035 AC109462.3-201ENST00000573934 613 ntBASIC17.69■□□□□ 0.42
TIMP2P16035 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms