Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KRT18P65-201ENST00000439811 1286 ntBASIC18.69■□□□□ 0.58
RARAP10276 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.69■□□□□ 0.58
RARAP10276 VENTXP5-201ENST00000523979 775 ntBASIC18.69■□□□□ 0.58
RARAP10276 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.69■□□□□ 0.58
RARAP10276 ZNF444P1-201ENST00000559497 298 ntBASIC18.69■□□□□ 0.58
RARAP10276 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.69■□□□□ 0.58
RARAP10276 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.69■□□□□ 0.58
RARAP10276 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARAP10276 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARAP10276 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.69■□□□□ 0.58
RARAP10276 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RARAP10276 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.69■□□□□ 0.58
RARAP10276 AC133963.1-201ENST00000504166 1679 ntBASIC18.69■□□□□ 0.58
RARAP10276 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARAP10276 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARAP10276 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RARAP10276 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.69■□□□□ 0.58
RARAP10276 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.68■□□□□ 0.58
RARAP10276 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.68■□□□□ 0.58
RARAP10276 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 LINC01311-201ENST00000565162 1445 ntBASIC18.68■□□□□ 0.58
RARAP10276 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RARAP10276 IGHGP-201ENST00000390555 1178 ntBASIC18.68■□□□□ 0.58
RARAP10276 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 SPDYE13P-201ENST00000445314 798 ntBASIC18.68■□□□□ 0.58
RARAP10276 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 DUX4L26-201ENST00000489078 1255 ntBASIC18.68■□□□□ 0.58
RARAP10276 AP003733.1-201ENST00000491725 852 ntBASIC18.68■□□□□ 0.58
RARAP10276 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.68■□□□□ 0.58
RARAP10276 AC022616.7-201ENST00000525383 220 ntBASIC18.68■□□□□ 0.58
RARAP10276 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.68■□□□□ 0.58
RARAP10276 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.68■□□□□ 0.58
RARAP10276 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARAP10276 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RARAP10276 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RARAP10276 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 AP001094.4-201ENST00000579008 2176 ntBASIC18.67■□□□□ 0.58
RARAP10276 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.67■□□□□ 0.58
RARAP10276 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 TMPOP1-202ENST00000424642 1267 ntBASIC18.67■□□□□ 0.58
RARAP10276 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.67■□□□□ 0.58
RARAP10276 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.67■□□□□ 0.58
RARAP10276 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.67■□□□□ 0.58
RARAP10276 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.67■□□□□ 0.58
RARAP10276 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.67■□□□□ 0.58
RARAP10276 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.67■□□□□ 0.58
RARAP10276 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.67■□□□□ 0.58
RARAP10276 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.67■□□□□ 0.58
RARAP10276 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RARAP10276 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RARAP10276 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.67■□□□□ 0.58
RARAP10276 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.67■□□□□ 0.58
RARAP10276 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RARAP10276 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.67■□□□□ 0.58
RARAP10276 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RARAP10276 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RARAP10276 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RARAP10276 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
RARAP10276 HCG11-201ENST00000411553 5696 ntBASIC18.67■□□□□ 0.58
RARAP10276 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARAP10276 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 AC022211.2-201ENST00000585075 2527 ntBASIC18.66■□□□□ 0.58
RARAP10276 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RARAP10276 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RARAP10276 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.66■□□□□ 0.58
RARAP10276 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms