Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 DUTP2-201ENST00000519164 463 ntBASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 AC004877.2-201ENST00000623941 599 ntBASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CSB-PGBD3P0DP91 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.45■■□□□ 1.35
CSB-PGBD3P0DP91 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CSB-PGBD3P0DP91 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CSB-PGBD3P0DP91 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CSB-PGBD3P0DP91 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 BCAR1-209ENST00000546196 1340 ntBASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 MRPL20P1-201ENST00000400819 433 ntBASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 AL031432.2-201ENST00000566714 459 ntBASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 AL928711.1-201ENST00000570165 459 ntBASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 AC010654.1-201ENST00000615722 808 ntBASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CSB-PGBD3P0DP91 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 CCND1-203ENST00000536559 553 ntTSL 3 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC092364.2-202ENST00000597012 1073 ntBASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC010507.1-201ENST00000633895 436 ntBASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CSB-PGBD3P0DP91 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 WDR53-203ENST00000429115 683 ntTSL 2 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 PDPK2P-202ENST00000562415 1191 ntBASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSB-PGBD3P0DP91 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CSB-PGBD3P0DP91 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms