Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 AC134043.2-201ENST00000624206 2238 ntBASIC20.65■□□□□ 0.9
CALM3P0DP25 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.65■□□□□ 0.9
CALM3P0DP25 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.65■□□□□ 0.9
CALM3P0DP25 AC103564.2-201ENST00000432853 1299 ntBASIC20.65■□□□□ 0.9
CALM3P0DP25 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 KRT18P56-201ENST00000507275 550 ntBASIC20.65■□□□□ 0.9
CALM3P0DP25 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.65■□□□□ 0.9
CALM3P0DP25 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.65■□□□□ 0.9
CALM3P0DP25 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.65■□□□□ 0.9
CALM3P0DP25 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.65■□□□□ 0.9
CALM3P0DP25 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALM3P0DP25 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.65■□□□□ 0.9
CALM3P0DP25 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.65■□□□□ 0.9
CALM3P0DP25 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.65■□□□□ 0.9
CALM3P0DP25 AC018470.1-201ENST00000624790 3129 ntBASIC20.64■□□□□ 0.9
CALM3P0DP25 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALM3P0DP25 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
CALM3P0DP25 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALM3P0DP25 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CALM3P0DP25 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.64■□□□□ 0.9
CALM3P0DP25 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 AC005104.2-201ENST00000427818 678 ntBASIC20.64■□□□□ 0.89
CALM3P0DP25 KRT16P4-201ENST00000453883 522 ntBASIC20.64■□□□□ 0.89
CALM3P0DP25 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.64■□□□□ 0.89
CALM3P0DP25 PRELID1P1-202ENST00000567272 903 ntBASIC20.64■□□□□ 0.89
CALM3P0DP25 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.64■□□□□ 0.89
CALM3P0DP25 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CALM3P0DP25 INTS4P1-201ENST00000438455 1935 ntBASIC20.64■□□□□ 0.89
CALM3P0DP25 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.64■□□□□ 0.89
CALM3P0DP25 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALM3P0DP25 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CALM3P0DP25 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CALM3P0DP25 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.63■□□□□ 0.89
CALM3P0DP25 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CALM3P0DP25 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CALM3P0DP25 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CALM3P0DP25 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CALM3P0DP25 RCN1P2-201ENST00000398357 915 ntBASIC20.63■□□□□ 0.89
CALM3P0DP25 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.63■□□□□ 0.89
CALM3P0DP25 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.63■□□□□ 0.89
CALM3P0DP25 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.63■□□□□ 0.89
CALM3P0DP25 FOSL1P1-201ENST00000511041 816 ntBASIC20.63■□□□□ 0.89
CALM3P0DP25 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.63■□□□□ 0.89
CALM3P0DP25 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.63■□□□□ 0.89
CALM3P0DP25 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.63■□□□□ 0.89
CALM3P0DP25 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.63■□□□□ 0.89
CALM3P0DP25 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.63■□□□□ 0.89
CALM3P0DP25 AL121772.3-201ENST00000610840 674 ntBASIC20.63■□□□□ 0.89
CALM3P0DP25 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CALM3P0DP25 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CALM3P0DP25 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.63■□□□□ 0.89
CALM3P0DP25 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CALM3P0DP25 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALM3P0DP25 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CALM3P0DP25 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALM3P0DP25 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CALM3P0DP25 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.62■□□□□ 0.89
CALM3P0DP25 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CALM3P0DP25 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.62■□□□□ 0.89
CALM3P0DP25 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.62■□□□□ 0.89
CALM3P0DP25 AC138894.3-201ENST00000603787 634 ntBASIC20.62■□□□□ 0.89
CALM3P0DP25 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CALM3P0DP25 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms