Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 FAM58CP-201ENST00000435741 640 ntBASIC18.72■□□□□ 0.59
RB1P06400 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.72■□□□□ 0.59
RB1P06400 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.72■□□□□ 0.59
RB1P06400 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.72■□□□□ 0.59
RB1P06400 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.72■□□□□ 0.59
RB1P06400 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RB1P06400 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.72■□□□□ 0.59
RB1P06400 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RB1P06400 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.72■□□□□ 0.59
RB1P06400 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.72■□□□□ 0.59
RB1P06400 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RB1P06400 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RB1P06400 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 AC018445.3-201ENST00000624177 1945 ntBASIC18.72■□□□□ 0.59
RB1P06400 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RB1P06400 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RB1P06400 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.71■□□□□ 0.59
RB1P06400 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.71■□□□□ 0.59
RB1P06400 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 PTCHD3P3-201ENST00000403073 906 ntBASIC18.71■□□□□ 0.59
RB1P06400 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.71■□□□□ 0.59
RB1P06400 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.71■□□□□ 0.59
RB1P06400 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.71■□□□□ 0.59
RB1P06400 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.71■□□□□ 0.59
RB1P06400 AC004835.2-201ENST00000603762 682 ntBASIC18.71■□□□□ 0.59
RB1P06400 AC023141.13-201ENST00000604991 943 ntBASIC18.71■□□□□ 0.59
RB1P06400 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RB1P06400 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.71■□□□□ 0.59
RB1P06400 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RB1P06400 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RB1P06400 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RB1P06400 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.71■□□□□ 0.59
RB1P06400 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RB1P06400 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.71■□□□□ 0.58
RB1P06400 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 DDX43P3-201ENST00000441064 443 ntBASIC18.7■□□□□ 0.58
RB1P06400 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.7■□□□□ 0.58
RB1P06400 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.7■□□□□ 0.58
RB1P06400 AL096865.1-201ENST00000606796 927 ntBASIC18.7■□□□□ 0.58
RB1P06400 AC019129.2-201ENST00000609837 1235 ntBASIC18.7■□□□□ 0.58
RB1P06400 AC025580.3-201ENST00000617932 1424 ntBASIC18.7■□□□□ 0.58
RB1P06400 AC093028.1-201ENST00000622998 982 ntBASIC18.7■□□□□ 0.58
RB1P06400 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.7■□□□□ 0.58
RB1P06400 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RB1P06400 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RB1P06400 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RB1P06400 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 PHGDH-209ENST00000641074 1780 ntBASIC18.69■□□□□ 0.58
RB1P06400 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.69■□□□□ 0.58
RB1P06400 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RB1P06400 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 AL139400.1-201ENST00000366220 510 ntBASIC18.69■□□□□ 0.58
RB1P06400 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 AL035633.1-201ENST00000406139 838 ntBASIC18.69■□□□□ 0.58
RB1P06400 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RB1P06400 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms