Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC3P02656 KRT8P45-201ENST00000414328 1447 ntBASIC14.32□□□□□ -0.12
APOC3P02656 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
APOC3P02656 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 AL365203.3-201ENST00000609742 2057 ntBASIC14.31□□□□□ -0.12
APOC3P02656 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 YBX1P4-201ENST00000392794 808 ntBASIC14.31□□□□□ -0.12
APOC3P02656 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 AC243732.1-201ENST00000612648 864 ntBASIC14.31□□□□□ -0.12
APOC3P02656 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.31□□□□□ -0.12
APOC3P02656 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 AC092171.3-201ENST00000610122 2651 ntBASIC14.31□□□□□ -0.12
APOC3P02656 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOC3P02656 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC3P02656 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC3P02656 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 FAM45BP-202ENST00000592932 1624 ntBASIC14.3□□□□□ -0.12
APOC3P02656 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC3P02656 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC3P02656 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
APOC3P02656 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 OR2I1P-210ENST00000642037 4691 ntBASIC14.3□□□□□ -0.12
APOC3P02656 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC3P02656 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
APOC3P02656 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOC3P02656 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC3P02656 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.29□□□□□ -0.12
APOC3P02656 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms