Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 AC063926.2-201ENST00000623766 1308 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMP1P01033 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TIMP1P01033 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 PMS2P4-201ENST00000412466 1052 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 AC015922.1-201ENST00000421102 1152 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.1■□□□□ 0.65
TIMP1P01033 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMP1P01033 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 AC112191.1-201ENST00000523689 701 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.1■□□□□ 0.65
TIMP1P01033 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TIMP1P01033 AL035252.4-201ENST00000624174 288 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMP1P01033 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMP1P01033 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.1■□□□□ 0.65
TIMP1P01033 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.1■□□□□ 0.65
TIMP1P01033 AC009336.1-201ENST00000608941 1553 ntBASIC19.1■□□□□ 0.65
TIMP1P01033 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.09■□□□□ 0.65
TIMP1P01033 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 AC005034.1-201ENST00000426657 489 ntBASIC19.09■□□□□ 0.65
TIMP1P01033 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.09■□□□□ 0.65
TIMP1P01033 FAM185BP-201ENST00000443595 716 ntBASIC19.09■□□□□ 0.65
TIMP1P01033 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 AC093214.1-201ENST00000511688 1107 ntBASIC19.09■□□□□ 0.65
TIMP1P01033 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
TIMP1P01033 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.09■□□□□ 0.65
TIMP1P01033 DUX4L27-201ENST00000554796 1261 ntBASIC19.09■□□□□ 0.65
TIMP1P01033 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.09■□□□□ 0.65
TIMP1P01033 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.09■□□□□ 0.65
TIMP1P01033 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
TIMP1P01033 AC009093.7-201ENST00000623853 1223 ntBASIC19.09■□□□□ 0.65
TIMP1P01033 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
TIMP1P01033 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 AC006116.8-202ENST00000587620 1550 ntBASIC19.09■□□□□ 0.65
TIMP1P01033 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMP1P01033 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMP1P01033 AC092919.2-201ENST00000623631 1645 ntBASIC19.08■□□□□ 0.65
TIMP1P01033 AL627223.1-201ENST00000416693 442 ntBASIC19.08■□□□□ 0.64
TIMP1P01033 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TIMP1P01033 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TIMP1P01033 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMP1P01033 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMP1P01033 IGHV3-52-201ENST00000519770 353 ntBASIC19.08■□□□□ 0.64
TIMP1P01033 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.08■□□□□ 0.64
TIMP1P01033 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMP1P01033 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.08■□□□□ 0.64
TIMP1P01033 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TIMP1P01033 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TIMP1P01033 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMP1P01033 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.08■□□□□ 0.64
TIMP1P01033 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TIMP1P01033 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.08■□□□□ 0.64
TIMP1P01033 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TIMP1P01033 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.07■□□□□ 0.64
TIMP1P01033 ADH5P3-201ENST00000433842 1137 ntBASIC19.07■□□□□ 0.64
TIMP1P01033 INGX-202ENST00000489074 768 ntBASIC19.07■□□□□ 0.64
TIMP1P01033 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.07■□□□□ 0.64
TIMP1P01033 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMP1P01033 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.07■□□□□ 0.64
TIMP1P01033 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms