Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX30O94993 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX30O94993 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SOX30O94993 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX30O94993 AC139713.2-201ENST00000641328 2723 ntBASIC16.59■□□□□ 0.25
SOX30O94993 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX30O94993 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.59■□□□□ 0.25
SOX30O94993 AL390719.2-201ENST00000606993 987 ntBASIC16.59■□□□□ 0.25
SOX30O94993 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX30O94993 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SOX30O94993 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SOX30O94993 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SOX30O94993 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 BX276092.7-203ENST00000637198 1536 ntBASIC16.59■□□□□ 0.25
SOX30O94993 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX30O94993 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SOX30O94993 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX30O94993 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX30O94993 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX30O94993 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.58■□□□□ 0.25
SOX30O94993 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX30O94993 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
SOX30O94993 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SOX30O94993 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SOX30O94993 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX30O94993 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX30O94993 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SOX30O94993 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.58■□□□□ 0.24
SOX30O94993 MTCL1P1-201ENST00000446207 792 ntBASIC16.58■□□□□ 0.24
SOX30O94993 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 AC068472.1-201ENST00000474589 881 ntBASIC16.58■□□□□ 0.24
SOX30O94993 AL136038.3-201ENST00000561909 1096 ntBASIC16.58■□□□□ 0.24
SOX30O94993 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.58■□□□□ 0.24
SOX30O94993 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.58■□□□□ 0.24
SOX30O94993 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.58■□□□□ 0.24
SOX30O94993 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.58■□□□□ 0.24
SOX30O94993 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SOX30O94993 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SOX30O94993 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.58■□□□□ 0.24
SOX30O94993 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SOX30O94993 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX30O94993 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX30O94993 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX30O94993 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX30O94993 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SOX30O94993 AC133963.1-201ENST00000504166 1679 ntBASIC16.57■□□□□ 0.24
SOX30O94993 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SOX30O94993 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX30O94993 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX30O94993 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms