Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 AL391807.1-203ENST00000604392 2365 ntBASIC18.03■□□□□ 0.48
USP1O94782 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
USP1O94782 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.03■□□□□ 0.48
USP1O94782 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 AC113347.1-201ENST00000413321 391 ntBASIC18.03■□□□□ 0.48
USP1O94782 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.03■□□□□ 0.48
USP1O94782 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 AL136038.4-201ENST00000603606 1261 ntBASIC18.03■□□□□ 0.48
USP1O94782 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 AC116407.2-201ENST00000613639 860 ntBASIC18.03■□□□□ 0.48
USP1O94782 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 AC079602.3-201ENST00000623931 403 ntBASIC18.03■□□□□ 0.48
USP1O94782 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.03■□□□□ 0.48
USP1O94782 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.03■□□□□ 0.48
USP1O94782 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP1O94782 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.02■□□□□ 0.48
USP1O94782 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.02■□□□□ 0.48
USP1O94782 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
USP1O94782 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.02■□□□□ 0.48
USP1O94782 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 AL137013.1-201ENST00000432946 1228 ntBASIC18.02■□□□□ 0.48
USP1O94782 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.02■□□□□ 0.48
USP1O94782 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.02■□□□□ 0.48
USP1O94782 COX11P1-201ENST00000489116 835 ntBASIC18.02■□□□□ 0.48
USP1O94782 AL441883.1-201ENST00000566170 1045 ntBASIC18.02■□□□□ 0.48
USP1O94782 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.02■□□□□ 0.48
USP1O94782 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP1O94782 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.02■□□□□ 0.48
USP1O94782 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP1O94782 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.02■□□□□ 0.47
USP1O94782 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP1O94782 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.02■□□□□ 0.47
USP1O94782 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP1O94782 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.02■□□□□ 0.47
USP1O94782 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP1O94782 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.02■□□□□ 0.47
USP1O94782 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.02■□□□□ 0.47
USP1O94782 SIRPAP1-201ENST00000448467 1770 ntBASIC18.02■□□□□ 0.47
USP1O94782 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.01■□□□□ 0.47
USP1O94782 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.01■□□□□ 0.47
USP1O94782 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
USP1O94782 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 TERF1P1-201ENST00000311003 1181 ntBASIC18.01■□□□□ 0.47
USP1O94782 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.01■□□□□ 0.47
USP1O94782 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
USP1O94782 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.01■□□□□ 0.47
USP1O94782 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USP1O94782 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.01■□□□□ 0.47
USP1O94782 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP1O94782 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
USP1O94782 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.01■□□□□ 0.47
USP1O94782 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms