Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN11O75508 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN11O75508 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 RBM17P3-201ENST00000417687 1192 ntBASIC18.16■□□□□ 0.5
CLDN11O75508 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 AC106795.1-205ENST00000512851 1056 ntBASIC18.16■□□□□ 0.5
CLDN11O75508 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.16■□□□□ 0.5
CLDN11O75508 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLDN11O75508 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN11O75508 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN11O75508 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN11O75508 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN11O75508 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN11O75508 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN11O75508 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN11O75508 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN11O75508 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN11O75508 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN11O75508 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN11O75508 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN11O75508 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CLDN11O75508 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CLDN11O75508 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
CLDN11O75508 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN11O75508 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN11O75508 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN11O75508 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CLDN11O75508 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.14■□□□□ 0.5
CLDN11O75508 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN11O75508 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN11O75508 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN11O75508 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.14■□□□□ 0.49
CLDN11O75508 AP001269.4-201ENST00000609611 512 ntBASIC18.14■□□□□ 0.49
CLDN11O75508 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN11O75508 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN11O75508 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN11O75508 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN11O75508 NOC2LP1-202ENST00000452600 2235 ntBASIC18.14■□□□□ 0.49
CLDN11O75508 AP005117.1-201ENST00000584346 1413 ntBASIC18.14■□□□□ 0.49
CLDN11O75508 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLDN11O75508 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms