Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT3O75175 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.29■□□□□ 0.36
CNOT3O75175 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
CNOT3O75175 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.29■□□□□ 0.36
CNOT3O75175 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 AL163051.1-201ENST00000569214 1512 ntBASIC17.29■□□□□ 0.36
CNOT3O75175 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNOT3O75175 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT3O75175 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT3O75175 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT3O75175 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CNOT3O75175 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CNOT3O75175 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT3O75175 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT3O75175 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.28■□□□□ 0.36
CNOT3O75175 TPSP2-201ENST00000561760 610 ntBASIC17.28■□□□□ 0.36
CNOT3O75175 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT3O75175 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNOT3O75175 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT3O75175 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT3O75175 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT3O75175 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CNOT3O75175 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT3O75175 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNOT3O75175 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT3O75175 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT3O75175 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 KRT18P1-202ENST00000452408 1331 ntBASIC17.27■□□□□ 0.36
CNOT3O75175 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT3O75175 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 IGHGP-201ENST00000390555 1178 ntBASIC17.27■□□□□ 0.36
CNOT3O75175 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT3O75175 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT3O75175 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 AC024563.2-201ENST00000603282 481 ntBASIC17.27■□□□□ 0.36
CNOT3O75175 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CNOT3O75175 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT3O75175 AL499627.1-201ENST00000569373 2188 ntBASIC17.27■□□□□ 0.36
CNOT3O75175 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CNOT3O75175 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.27■□□□□ 0.35
CNOT3O75175 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CNOT3O75175 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT3O75175 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.27■□□□□ 0.35
CNOT3O75175 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.35
CNOT3O75175 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT3O75175 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT3O75175 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT3O75175 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CNOT3O75175 PCDHA12-202ENST00000613593 2588 ntBASIC17.26■□□□□ 0.35
CNOT3O75175 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms