Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCMT2O60294 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCMT2O60294 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LCMT2O60294 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.02■□□□□ 0.32
LCMT2O60294 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.02■□□□□ 0.32
LCMT2O60294 HCG4P8-203ENST00000443049 980 ntBASIC17.02■□□□□ 0.32
LCMT2O60294 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LCMT2O60294 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.02■□□□□ 0.32
LCMT2O60294 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.02■□□□□ 0.32
LCMT2O60294 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.02■□□□□ 0.32
LCMT2O60294 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.02■□□□□ 0.32
LCMT2O60294 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCMT2O60294 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
LCMT2O60294 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCMT2O60294 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LCMT2O60294 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCMT2O60294 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.01■□□□□ 0.31
LCMT2O60294 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.01■□□□□ 0.31
LCMT2O60294 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.01■□□□□ 0.31
LCMT2O60294 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.01■□□□□ 0.31
LCMT2O60294 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.01■□□□□ 0.31
LCMT2O60294 AC007967.3-201ENST00000434308 558 ntBASIC17.01■□□□□ 0.31
LCMT2O60294 DDX43P3-201ENST00000441064 443 ntBASIC17.01■□□□□ 0.31
LCMT2O60294 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.01■□□□□ 0.31
LCMT2O60294 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.01■□□□□ 0.31
LCMT2O60294 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.01■□□□□ 0.31
LCMT2O60294 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.01■□□□□ 0.31
LCMT2O60294 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.01■□□□□ 0.31
LCMT2O60294 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 AC012615.1-201ENST00000565797 1299 ntBASIC17.01■□□□□ 0.31
LCMT2O60294 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.01■□□□□ 0.31
LCMT2O60294 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.01■□□□□ 0.31
LCMT2O60294 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
LCMT2O60294 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LCMT2O60294 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LCMT2O60294 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LCMT2O60294 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LCMT2O60294 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LCMT2O60294 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17■□□□□ 0.31
LCMT2O60294 REXO1L11P-201ENST00000620964 1927 ntBASIC17■□□□□ 0.31
LCMT2O60294 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
LCMT2O60294 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
LCMT2O60294 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 AC104819.1-201ENST00000504587 486 ntBASIC17■□□□□ 0.31
LCMT2O60294 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17■□□□□ 0.31
LCMT2O60294 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17■□□□□ 0.31
LCMT2O60294 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17■□□□□ 0.31
LCMT2O60294 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17■□□□□ 0.31
LCMT2O60294 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17■□□□□ 0.31
LCMT2O60294 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LCMT2O60294 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.99■□□□□ 0.31
LCMT2O60294 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LCMT2O60294 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.99■□□□□ 0.31
LCMT2O60294 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LCMT2O60294 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.99■□□□□ 0.31
LCMT2O60294 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LCMT2O60294 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.99■□□□□ 0.31
LCMT2O60294 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LCMT2O60294 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LCMT2O60294 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LCMT2O60294 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LCMT2O60294 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms