Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 IGHV3-41-201ENST00000613121 348 ntBASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AC124864.1-201ENST00000623408 392 ntBASIC15.87■□□□□ 0.13
TRAF3IP2O43734 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 PKD1P1-201ENST00000458669 6805 ntBASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 AL358472.4-201ENST00000633140 710 ntBASIC15.86■□□□□ 0.13
TRAF3IP2O43734 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP2O43734 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 ARMC10P1-201ENST00000313754 855 ntBASIC15.85■□□□□ 0.13
TRAF3IP2O43734 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 AC096633.1-201ENST00000422446 749 ntBASIC15.85■□□□□ 0.13
TRAF3IP2O43734 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP2O43734 AL355312.1-201ENST00000407115 2176 ntBASIC15.85■□□□□ 0.13
TRAF3IP2O43734 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 TSSC2-201ENST00000450217 709 ntBASIC15.84■□□□□ 0.13
TRAF3IP2O43734 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP2O43734 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms