Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.03■□□□□ 0.48
KDELR3O43731 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.03■□□□□ 0.48
KDELR3O43731 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KDELR3O43731 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.03■□□□□ 0.48
KDELR3O43731 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.03■□□□□ 0.48
KDELR3O43731 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.03■□□□□ 0.48
KDELR3O43731 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 NOC2LP2-201ENST00000407594 1944 ntBASIC18.03■□□□□ 0.48
KDELR3O43731 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KDELR3O43731 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
KDELR3O43731 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.02■□□□□ 0.48
KDELR3O43731 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.02■□□□□ 0.48
KDELR3O43731 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.02■□□□□ 0.48
KDELR3O43731 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.02■□□□□ 0.48
KDELR3O43731 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.02■□□□□ 0.48
KDELR3O43731 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KDELR3O43731 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
KDELR3O43731 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KDELR3O43731 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.02■□□□□ 0.47
KDELR3O43731 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KDELR3O43731 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KDELR3O43731 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.02■□□□□ 0.47
KDELR3O43731 SIRPAP1-201ENST00000448467 1770 ntBASIC18.02■□□□□ 0.47
KDELR3O43731 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KDELR3O43731 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 ABCD1P5-201ENST00000445663 754 ntBASIC18.01■□□□□ 0.47
KDELR3O43731 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.01■□□□□ 0.47
KDELR3O43731 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.01■□□□□ 0.47
KDELR3O43731 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.01■□□□□ 0.47
KDELR3O43731 AD001527.2-201ENST00000622994 785 ntBASIC18.01■□□□□ 0.47
KDELR3O43731 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KDELR3O43731 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 REXO1L11P-201ENST00000620964 1927 ntBASIC18.01■□□□□ 0.47
KDELR3O43731 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KDELR3O43731 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.01■□□□□ 0.47
KDELR3O43731 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
KDELR3O43731 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18■□□□□ 0.47
KDELR3O43731 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18■□□□□ 0.47
KDELR3O43731 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18■□□□□ 0.47
KDELR3O43731 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18■□□□□ 0.47
KDELR3O43731 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18■□□□□ 0.47
KDELR3O43731 AC005104.2-201ENST00000427818 678 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms