Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.96■□□□□ 0.79
ACTN4O43707 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 AP001094.4-201ENST00000579008 2176 ntBASIC19.96■□□□□ 0.79
ACTN4O43707 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 AK4P3-201ENST00000418260 669 ntBASIC19.96■□□□□ 0.79
ACTN4O43707 AC104076.2-201ENST00000448912 469 ntBASIC19.96■□□□□ 0.79
ACTN4O43707 AC068472.1-201ENST00000474589 881 ntBASIC19.96■□□□□ 0.79
ACTN4O43707 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.96■□□□□ 0.79
ACTN4O43707 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.96■□□□□ 0.79
ACTN4O43707 RNF126P1-202ENST00000569893 925 ntBASIC19.96■□□□□ 0.79
ACTN4O43707 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.96■□□□□ 0.79
ACTN4O43707 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.96■□□□□ 0.79
ACTN4O43707 AL390719.2-201ENST00000606993 987 ntBASIC19.96■□□□□ 0.79
ACTN4O43707 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.96■□□□□ 0.79
ACTN4O43707 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.96■□□□□ 0.79
ACTN4O43707 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.96■□□□□ 0.79
ACTN4O43707 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.96■□□□□ 0.79
ACTN4O43707 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
ACTN4O43707 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ACTN4O43707 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.95■□□□□ 0.78
ACTN4O43707 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ACTN4O43707 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.95■□□□□ 0.78
ACTN4O43707 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.95■□□□□ 0.78
ACTN4O43707 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.95■□□□□ 0.78
ACTN4O43707 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.95■□□□□ 0.78
ACTN4O43707 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.95■□□□□ 0.78
ACTN4O43707 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.95■□□□□ 0.78
ACTN4O43707 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.95■□□□□ 0.78
ACTN4O43707 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.95■□□□□ 0.78
ACTN4O43707 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.95■□□□□ 0.78
ACTN4O43707 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ACTN4O43707 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ACTN4O43707 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ACTN4O43707 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ACTN4O43707 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ACTN4O43707 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 MTCL1P1-201ENST00000446207 792 ntBASIC19.94■□□□□ 0.78
ACTN4O43707 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 AC005332.3-201ENST00000589904 676 ntBASIC19.94■□□□□ 0.78
ACTN4O43707 AC083849.1-201ENST00000615227 514 ntBASIC19.94■□□□□ 0.78
ACTN4O43707 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
ACTN4O43707 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ACTN4O43707 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ACTN4O43707 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ACTN4O43707 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.93■□□□□ 0.78
ACTN4O43707 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ACTN4O43707 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ACTN4O43707 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ACTN4O43707 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms