Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.48■□□□□ 0.55
MSI1O43347 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MSI1O43347 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MSI1O43347 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MSI1O43347 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MSI1O43347 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.48■□□□□ 0.55
MSI1O43347 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MSI1O43347 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MSI1O43347 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
MSI1O43347 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MSI1O43347 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MSI1O43347 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.47■□□□□ 0.55
MSI1O43347 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.47■□□□□ 0.55
MSI1O43347 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.47■□□□□ 0.55
MSI1O43347 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.47■□□□□ 0.55
MSI1O43347 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
MSI1O43347 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.47■□□□□ 0.55
MSI1O43347 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.47■□□□□ 0.55
MSI1O43347 LINC01711-201ENST00000598340 967 ntBASIC18.47■□□□□ 0.55
MSI1O43347 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MSI1O43347 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
MSI1O43347 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.47■□□□□ 0.55
MSI1O43347 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 AC097374.2-201ENST00000618617 1306 ntBASIC18.47■□□□□ 0.55
MSI1O43347 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MSI1O43347 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
MSI1O43347 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
MSI1O43347 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.47■□□□□ 0.55
MSI1O43347 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.46■□□□□ 0.55
MSI1O43347 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MSI1O43347 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.46■□□□□ 0.55
MSI1O43347 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.46■□□□□ 0.55
MSI1O43347 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.46■□□□□ 0.55
MSI1O43347 AC132008.2-207ENST00000454517 770 ntBASIC18.46■□□□□ 0.55
MSI1O43347 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.46■□□□□ 0.55
MSI1O43347 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.46■□□□□ 0.55
MSI1O43347 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.46■□□□□ 0.55
MSI1O43347 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
MSI1O43347 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MSI1O43347 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MSI1O43347 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.46■□□□□ 0.55
MSI1O43347 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSI1O43347 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
MSI1O43347 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
MSI1O43347 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
MSI1O43347 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.45■□□□□ 0.54
MSI1O43347 NOC2LP1-202ENST00000452600 2235 ntBASIC18.45■□□□□ 0.54
MSI1O43347 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.45■□□□□ 0.54
MSI1O43347 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 FAM220CP-201ENST00000395253 831 ntBASIC18.45■□□□□ 0.54
MSI1O43347 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.45■□□□□ 0.54
MSI1O43347 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.45■□□□□ 0.54
MSI1O43347 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.45■□□□□ 0.54
MSI1O43347 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MSI1O43347 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.45■□□□□ 0.54
MSI1O43347 REXO1L6P-202ENST00000619970 1078 ntBASIC18.45■□□□□ 0.54
MSI1O43347 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.45■□□□□ 0.54
MSI1O43347 AC012317.2-201ENST00000623305 2251 ntBASIC18.45■□□□□ 0.54
MSI1O43347 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
MSI1O43347 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms