Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PCDH17O14917 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH17O14917 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH17O14917 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH17O14917 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH17O14917 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 BCL2-203ENST00000589955 5011 ntBASIC17.01■□□□□ 0.31
PCDH17O14917 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH17O14917 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17■□□□□ 0.31
PCDH17O14917 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17■□□□□ 0.31
PCDH17O14917 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17■□□□□ 0.31
PCDH17O14917 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDH17O14917 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17■□□□□ 0.31
PCDH17O14917 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDH17O14917 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17■□□□□ 0.31
PCDH17O14917 LINC00265-3P-201ENST00000447588 903 ntBASIC17■□□□□ 0.31
PCDH17O14917 TOB2P1-201ENST00000469761 992 ntBASIC17■□□□□ 0.31
PCDH17O14917 AC104819.1-201ENST00000504587 486 ntBASIC17■□□□□ 0.31
PCDH17O14917 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17■□□□□ 0.31
PCDH17O14917 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17■□□□□ 0.31
PCDH17O14917 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17■□□□□ 0.31
PCDH17O14917 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17■□□□□ 0.31
PCDH17O14917 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 AC011840.4-201ENST00000578471 627 ntBASIC17■□□□□ 0.31
PCDH17O14917 LINC01711-201ENST00000598340 967 ntBASIC17■□□□□ 0.31
PCDH17O14917 AL353801.3-201ENST00000609898 542 ntBASIC17■□□□□ 0.31
PCDH17O14917 AL121772.3-201ENST00000610840 674 ntBASIC17■□□□□ 0.31
PCDH17O14917 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDH17O14917 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17■□□□□ 0.31
PCDH17O14917 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH17O14917 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
PCDH17O14917 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDH17O14917 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 AC139713.2-201ENST00000641328 2723 ntBASIC16.99■□□□□ 0.31
PCDH17O14917 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH17O14917 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH17O14917 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH17O14917 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDH17O14917 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDH17O14917 AC111152.3-201ENST00000569699 673 ntBASIC16.99■□□□□ 0.31
PCDH17O14917 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH17O14917 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 AC004263.2-201ENST00000617183 678 ntBASIC16.99■□□□□ 0.31
PCDH17O14917 AC124864.1-201ENST00000623408 392 ntBASIC16.99■□□□□ 0.31
PCDH17O14917 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH17O14917 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH17O14917 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PCDH17O14917 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 AC233702.3-201ENST00000578656 1387 ntBASIC16.99■□□□□ 0.31
PCDH17O14917 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH17O14917 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH17O14917 AL024508.2-201ENST00000607749 1894 ntBASIC16.99■□□□□ 0.31
PCDH17O14917 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH17O14917 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDH17O14917 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH17O14917 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH17O14917 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH17O14917 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms