Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDX4O14627 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.03■□□□□ 0.32
CDX4O14627 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.03■□□□□ 0.32
CDX4O14627 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDX4O14627 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.03■□□□□ 0.32
CDX4O14627 PMS2P4-201ENST00000412466 1052 ntBASIC17.03■□□□□ 0.32
CDX4O14627 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 AC093214.1-201ENST00000511688 1107 ntBASIC17.03■□□□□ 0.32
CDX4O14627 DUTP2-201ENST00000519164 463 ntBASIC17.03■□□□□ 0.32
CDX4O14627 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.03■□□□□ 0.32
CDX4O14627 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDX4O14627 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDX4O14627 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.03■□□□□ 0.32
CDX4O14627 AC093010.1-201ENST00000473625 1624 ntBASIC17.03■□□□□ 0.32
CDX4O14627 AC092919.2-201ENST00000623631 1645 ntBASIC17.03■□□□□ 0.32
CDX4O14627 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
CDX4O14627 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDX4O14627 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDX4O14627 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 AC006116.8-202ENST00000587620 1550 ntBASIC17.02■□□□□ 0.32
CDX4O14627 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.02■□□□□ 0.32
CDX4O14627 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.02■□□□□ 0.32
CDX4O14627 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.02■□□□□ 0.32
CDX4O14627 ADH5P3-201ENST00000433842 1137 ntBASIC17.02■□□□□ 0.32
CDX4O14627 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 INGX-202ENST00000489074 768 ntBASIC17.02■□□□□ 0.32
CDX4O14627 AC067863.1-201ENST00000494933 530 ntBASIC17.02■□□□□ 0.32
CDX4O14627 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.02■□□□□ 0.32
CDX4O14627 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.02■□□□□ 0.32
CDX4O14627 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDX4O14627 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.02■□□□□ 0.32
CDX4O14627 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.02■□□□□ 0.32
CDX4O14627 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.02■□□□□ 0.32
CDX4O14627 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.02■□□□□ 0.32
CDX4O14627 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.02■□□□□ 0.32
CDX4O14627 AC109462.3-201ENST00000573934 613 ntBASIC17.02■□□□□ 0.32
CDX4O14627 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.02■□□□□ 0.32
CDX4O14627 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CDX4O14627 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDX4O14627 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.02■□□□□ 0.32
CDX4O14627 AC009093.7-201ENST00000623853 1223 ntBASIC17.02■□□□□ 0.32
CDX4O14627 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.02■□□□□ 0.31
CDX4O14627 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.02■□□□□ 0.31
CDX4O14627 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.02■□□□□ 0.31
CDX4O14627 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.02■□□□□ 0.31
CDX4O14627 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDX4O14627 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.01■□□□□ 0.31
CDX4O14627 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDX4O14627 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDX4O14627 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDX4O14627 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDX4O14627 AL627223.1-201ENST00000416693 442 ntBASIC17.01■□□□□ 0.31
CDX4O14627 LINC00982-205ENST00000420957 435 ntBASIC17.01■□□□□ 0.31
CDX4O14627 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.01■□□□□ 0.31
CDX4O14627 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDX4O14627 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.01■□□□□ 0.31
CDX4O14627 STK19B-204ENST00000512515 211 ntBASIC17.01■□□□□ 0.31
CDX4O14627 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms