Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
AP3D1O14617 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
AP3D1O14617 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3D1O14617 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 LIN28AP1-201ENST00000429574 405 ntBASIC16.68■□□□□ 0.26
AP3D1O14617 ATP5G1P1-201ENST00000448724 379 ntBASIC16.68■□□□□ 0.26
AP3D1O14617 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3D1O14617 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
AP3D1O14617 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3D1O14617 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3D1O14617 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3D1O14617 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
AP3D1O14617 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 AC092865.7-201ENST00000641832 219 ntBASIC16.68■□□□□ 0.26
AP3D1O14617 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 AC012317.2-201ENST00000623305 2251 ntBASIC16.68■□□□□ 0.26
AP3D1O14617 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3D1O14617 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP3D1O14617 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
AP3D1O14617 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP3D1O14617 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3D1O14617 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3D1O14617 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3D1O14617 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3D1O14617 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 AP000523.1-201ENST00000398242 1049 ntBASIC16.67■□□□□ 0.26
AP3D1O14617 AC113347.1-201ENST00000413321 391 ntBASIC16.67■□□□□ 0.26
AP3D1O14617 AC211429.1-201ENST00000415277 523 ntBASIC16.67■□□□□ 0.26
AP3D1O14617 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.67■□□□□ 0.26
AP3D1O14617 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.67■□□□□ 0.26
AP3D1O14617 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
AP3D1O14617 AC005363.2-201ENST00000618631 242 ntBASIC16.67■□□□□ 0.26
AP3D1O14617 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3D1O14617 AC046158.3-201ENST00000624947 2558 ntBASIC16.67■□□□□ 0.26
AP3D1O14617 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP3D1O14617 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3D1O14617 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3D1O14617 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 TERF1P1-201ENST00000311003 1181 ntBASIC16.66■□□□□ 0.26
AP3D1O14617 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3D1O14617 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
AP3D1O14617 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3D1O14617 AC008687.5-201ENST00000593746 558 ntBASIC16.66■□□□□ 0.26
AP3D1O14617 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
AP3D1O14617 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
AP3D1O14617 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
AP3D1O14617 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3D1O14617 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms