Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CUX2O14529 PTPA-220ENST00000436883 532 ntTSL 4 BASIC30.16■■■□□ 2.42
CUX2O14529 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC30.16■■■□□ 2.42
CUX2O14529 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CUX2O14529 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CUX2O14529 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CUX2O14529 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
CUX2O14529 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CUX2O14529 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CUX2O14529 ADK-206ENST00000541550 2222 ntTSL 2 BASIC30.15■■■□□ 2.42
CUX2O14529 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CUX2O14529 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CUX2O14529 AC002056.1-201ENST00000395613 760 ntBASIC30.15■■■□□ 2.42
CUX2O14529 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
CUX2O14529 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC30.15■■■□□ 2.42
CUX2O14529 SPDYE14P-201ENST00000442619 822 ntBASIC30.15■■■□□ 2.42
CUX2O14529 AC079140.1-201ENST00000508039 487 ntBASIC30.15■■■□□ 2.42
CUX2O14529 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CUX2O14529 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CUX2O14529 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC30.15■■■□□ 2.42
CUX2O14529 AL161938.1-201ENST00000569833 2180 ntBASIC30.15■■■□□ 2.42
CUX2O14529 PCDHAC2-203ENST00000615316 3011 ntBASIC30.15■■■□□ 2.42
CUX2O14529 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CUX2O14529 AC008677.1-201ENST00000519230 1561 ntBASIC30.15■■■□□ 2.42
CUX2O14529 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC30.15■■■□□ 2.42
CUX2O14529 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC30.14■■■□□ 2.42
CUX2O14529 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC30.14■■■□□ 2.42
CUX2O14529 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CUX2O14529 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CUX2O14529 AC092933.1-201ENST00000393644 945 ntBASIC30.14■■■□□ 2.42
CUX2O14529 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC30.14■■■□□ 2.42
CUX2O14529 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CUX2O14529 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CUX2O14529 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
CUX2O14529 RAB34-224ENST00000636513 888 ntTSL 5 BASIC30.14■■■□□ 2.42
CUX2O14529 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CUX2O14529 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC30.14■■■□□ 2.42
CUX2O14529 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CUX2O14529 BID-204ENST00000399767 2129 ntTSL 2 BASIC30.14■■■□□ 2.42
CUX2O14529 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CUX2O14529 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
CUX2O14529 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.41
CUX2O14529 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC30.13■■■□□ 2.41
CUX2O14529 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CUX2O14529 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC30.13■■■□□ 2.41
CUX2O14529 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC30.13■■■□□ 2.41
CUX2O14529 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CUX2O14529 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC30.13■■■□□ 2.41
CUX2O14529 FAM8A2P-201ENST00000528813 1142 ntBASIC30.13■■■□□ 2.41
CUX2O14529 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CUX2O14529 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC30.13■■■□□ 2.41
CUX2O14529 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC30.13■■■□□ 2.41
CUX2O14529 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC30.13■■■□□ 2.41
CUX2O14529 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CUX2O14529 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC30.13■■■□□ 2.41
CUX2O14529 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CUX2O14529 AL049812.1-201ENST00000432563 2267 ntBASIC30.13■■■□□ 2.41
CUX2O14529 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
CUX2O14529 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CUX2O14529 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC30.12■■■□□ 2.41
CUX2O14529 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CUX2O14529 MYLKP1-201ENST00000509077 1580 ntBASIC30.12■■■□□ 2.41
CUX2O14529 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC30.12■■■□□ 2.41
CUX2O14529 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC30.12■■■□□ 2.41
CUX2O14529 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CUX2O14529 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 AL353593.2-201ENST00000602529 1483 ntBASIC30.12■■■□□ 2.41
CUX2O14529 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC30.12■■■□□ 2.41
CUX2O14529 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC30.12■■■□□ 2.41
CUX2O14529 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 MIR658-201ENST00000385210 100 ntBASIC30.12■■■□□ 2.41
CUX2O14529 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC30.12■■■□□ 2.41
CUX2O14529 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC30.12■■■□□ 2.41
CUX2O14529 S100A2-206ENST00000497140 697 ntTSL 2 BASIC30.12■■■□□ 2.41
CUX2O14529 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CUX2O14529 AC106886.1-201ENST00000568660 600 ntBASIC30.12■■■□□ 2.41
CUX2O14529 AC004233.3-201ENST00000607794 1269 ntBASIC30.12■■■□□ 2.41
CUX2O14529 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CUX2O14529 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC30.11■■■□□ 2.41
CUX2O14529 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 AC010460.3-201ENST00000511359 1579 ntBASIC30.11■■■□□ 2.41
CUX2O14529 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC30.11■■■□□ 2.41
CUX2O14529 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
CUX2O14529 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CUX2O14529 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CUX2O14529 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC30.11■■■□□ 2.41
CUX2O14529 NME6-203ENST00000415644 849 ntTSL 2 BASIC30.11■■■□□ 2.41
CUX2O14529 FALEC-201ENST00000416894 566 ntTSL 3 BASIC30.11■■■□□ 2.41
CUX2O14529 SPDYE7P-202ENST00000420373 878 ntBASIC30.11■■■□□ 2.41
CUX2O14529 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC30.11■■■□□ 2.41
CUX2O14529 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms