Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDC7O00311 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.48■□□□□ 0.39
CDC7O00311 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.48■□□□□ 0.39
CDC7O00311 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.48■□□□□ 0.39
CDC7O00311 AL390719.2-201ENST00000606993 987 ntBASIC17.48■□□□□ 0.39
CDC7O00311 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.48■□□□□ 0.39
CDC7O00311 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC7O00311 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC7O00311 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 Z83836.1-201ENST00000624605 1642 ntBASIC17.47■□□□□ 0.39
CDC7O00311 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDC7O00311 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.47■□□□□ 0.39
CDC7O00311 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.47■□□□□ 0.39
CDC7O00311 TMPOP1-202ENST00000424642 1267 ntBASIC17.47■□□□□ 0.39
CDC7O00311 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 DDX43P3-201ENST00000441064 443 ntBASIC17.47■□□□□ 0.39
CDC7O00311 AC068472.1-201ENST00000474589 881 ntBASIC17.47■□□□□ 0.39
CDC7O00311 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.47■□□□□ 0.39
CDC7O00311 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 AC012313.1-201ENST00000593393 3059 ntBASIC17.47■□□□□ 0.39
CDC7O00311 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC7O00311 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDC7O00311 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.47■□□□□ 0.39
CDC7O00311 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC7O00311 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC7O00311 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC7O00311 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC7O00311 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 MTCL1P1-201ENST00000446207 792 ntBASIC17.46■□□□□ 0.39
CDC7O00311 AL671277.2-201ENST00000458060 996 ntBASIC17.46■□□□□ 0.39
CDC7O00311 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC7O00311 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CDC7O00311 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC7O00311 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDC7O00311 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC7O00311 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDC7O00311 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDC7O00311 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC7O00311 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.46■□□□□ 0.39
CDC7O00311 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC7O00311 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
CDC7O00311 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDC7O00311 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC7O00311 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.45■□□□□ 0.38
CDC7O00311 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC7O00311 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms