Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM1O00151 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM1O00151 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM1O00151 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.99■□□□□ 0.31
PDLIM1O00151 AC011506.1-201ENST00000474329 610 ntBASIC16.99■□□□□ 0.31
PDLIM1O00151 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.99■□□□□ 0.31
PDLIM1O00151 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 MIR6786-201ENST00000616843 113 ntBASIC16.99■□□□□ 0.31
PDLIM1O00151 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM1O00151 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.99■□□□□ 0.31
PDLIM1O00151 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM1O00151 FSCN1P1-201ENST00000568912 1481 ntBASIC16.99■□□□□ 0.31
PDLIM1O00151 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM1O00151 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 TSPY15P-201ENST00000457163 923 ntBASIC16.98■□□□□ 0.31
PDLIM1O00151 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.98■□□□□ 0.31
PDLIM1O00151 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PDLIM1O00151 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 AC130371.2-201ENST00000619443 611 ntBASIC16.98■□□□□ 0.31
PDLIM1O00151 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM1O00151 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM1O00151 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM1O00151 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM1O00151 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM1O00151 KRT18P55-202ENST00000578578 1546 ntBASIC16.97■□□□□ 0.31
PDLIM1O00151 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PDLIM1O00151 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
PDLIM1O00151 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 RBM17P1-201ENST00000453646 1190 ntBASIC16.97■□□□□ 0.31
PDLIM1O00151 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM1O00151 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM1O00151 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM1O00151 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM1O00151 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PDLIM1O00151 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM1O00151 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms