Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 AC007967.3-201ENST00000434308 558 ntBASIC15.73■□□□□ 0.11
NPIPB4C9JG80 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 AC011840.4-201ENST00000578471 627 ntBASIC15.73■□□□□ 0.11
NPIPB4C9JG80 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.73■□□□□ 0.11
NPIPB4C9JG80 AL121672.3-201ENST00000608644 468 ntBASIC15.73■□□□□ 0.11
NPIPB4C9JG80 AL139327.4-201ENST00000612362 153 ntBASIC15.73■□□□□ 0.11
NPIPB4C9JG80 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB4C9JG80 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC141586.5-201ENST00000624546 2050 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC005332.1-201ENST00000577698 1310 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CHCHD2P8-201ENST00000429873 447 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 VENTXP7-201ENST00000475503 772 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 FAM86EP-206ENST00000510506 987 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AC124864.1-201ENST00000623408 392 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 AL590326.2-201ENST00000625139 305 ntBASIC15.72■□□□□ 0.11
NPIPB4C9JG80 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NPIPB4C9JG80 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 AC103564.2-201ENST00000432853 1299 ntBASIC15.71■□□□□ 0.11
NPIPB4C9JG80 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 BX276092.5-203ENST00000456199 560 ntBASIC15.71■□□□□ 0.11
NPIPB4C9JG80 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 KRT18P21-201ENST00000515767 1272 ntBASIC15.71■□□□□ 0.11
NPIPB4C9JG80 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPB4C9JG80 AC005336.2-201ENST00000593183 939 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms