Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM6-TRIM34B2RNG4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 TSPY22P-201ENST00000427496 604 ntBASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC068472.1-201ENST00000474589 881 ntBASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AL136038.3-201ENST00000561909 1096 ntBASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC087388.1-201ENST00000571370 1112 ntBASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AL355312.1-201ENST00000407115 2176 ntBASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM6-TRIM34B2RNG4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 MTCL1P1-201ENST00000446207 792 ntBASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC116407.2-201ENST00000613639 860 ntBASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AL590326.2-201ENST00000625139 305 ntBASIC21.78■■□□□ 1.08
TRIM6-TRIM34B2RNG4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC011498.5-201ENST00000592027 486 ntBASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AL121956.5-201ENST00000625261 221 ntBASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRIM6-TRIM34B2RNG4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM6-TRIM34B2RNG4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM6-TRIM34B2RNG4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms