Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV5A0A0B4J249 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 CD99P1-205ENST00000527459 561 ntBASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 WWOX-216ENST00000569818 525 ntBASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 AL023803.3-201ENST00000615559 522 ntBASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 AL118508.1-201ENST00000613502 2345 ntBASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV5A0A0B4J249 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 AL353719.1-201ENST00000566847 864 ntBASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV5A0A0B4J249 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV5A0A0B4J249 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 HLA-J-201ENST00000462773 1622 ntBASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms