Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 MIR940-201ENST00000401276 94 ntBASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 POLD2P1-201ENST00000511220 997 ntBASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 AC145285.3-201ENST00000564603 959 ntBASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 TERC-201ENST00000602385 541 ntBASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 AC104109.2-201ENST00000602919 1418 ntBASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV19A0A0A6YYK7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 PRYP5-201ENST00000451909 266 ntBASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV19A0A0A6YYK7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 AL353593.2-201ENST00000602529 1483 ntBASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 AC100803.2-201ENST00000562459 1963 ntBASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 AL020989.1-201ENST00000422979 469 ntBASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 GPALPP1-207ENST00000611650 899 ntBASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV19A0A0A6YYK7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 BX276092.7-203ENST00000637198 1536 ntBASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 AP002414.3-201ENST00000589352 1468 ntBASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 PMS2P7-201ENST00000506558 1336 ntBASIC18.33■□□□□ 0.53
TRAV19A0A0A6YYK7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV19A0A0A6YYK7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV19A0A0A6YYK7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.33■□□□□ 0.52
TRAV19A0A0A6YYK7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV19A0A0A6YYK7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV19A0A0A6YYK7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TRAV19A0A0A6YYK7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms