Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
TRBV6-7A0A0A0MS04 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC128688.1-201ENST00000487626 519 ntBASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRBV6-7A0A0A0MS04 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC106886.4-201ENST00000623557 2502 ntBASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 AL512604.3-201ENST00000569583 964 ntBASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 MIR3917-201ENST00000580971 93 ntBASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC024243.1-201ENST00000609234 778 ntBASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 LINC00167-201ENST00000530583 1419 ntBASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 KRT17P2-201ENST00000300992 1314 ntBASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-7A0A0A0MS04 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms