Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 TSPY5P-201ENST00000426936 936 ntBASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 ZNF444P1-201ENST00000559497 298 ntBASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AC073508.3-201ENST00000619697 1419 ntBASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 AC012317.2-201ENST00000623305 2251 ntBASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRGV1A0A0A0MS02 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 AC132938.6-201ENST00000623828 1655 ntBASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 AC079602.3-201ENST00000623931 403 ntBASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRGV1A0A0A0MS02 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 KRT18P55-202ENST00000578578 1546 ntBASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.93□□□□□ -0.34
TRGV1A0A0A0MS02 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms