Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.66■■■□□ 2.02
PCDHA2Q9Y5H9 KRT18P60-201ENST00000312876 1297 ntBASIC27.66■■■□□ 2.02
PCDHA2Q9Y5H9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 AC007029.1-201ENST00000604183 313 ntBASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHA2Q9Y5H9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
PCDHA2Q9Y5H9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHA2Q9Y5H9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHA2Q9Y5H9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
PCDHA2Q9Y5H9 SMPD5-203ENST00000639008 1464 ntBASIC27.63■■■□□ 2.01
PCDHA2Q9Y5H9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.62■■■□□ 2.01
PCDHA2Q9Y5H9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDHA2Q9Y5H9 AL033527.3-201ENST00000566366 1196 ntBASIC27.62■■■□□ 2.01
PCDHA2Q9Y5H9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
PCDHA2Q9Y5H9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PCDHA2Q9Y5H9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.61■■■□□ 2.01
PCDHA2Q9Y5H9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PCDHA2Q9Y5H9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PCDHA2Q9Y5H9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
PCDHA2Q9Y5H9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.6■■■□□ 2.01
PCDHA2Q9Y5H9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHA2Q9Y5H9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHA2Q9Y5H9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.6■■■□□ 2.01
PCDHA2Q9Y5H9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHA2Q9Y5H9 AC025884.2-201ENST00000553429 711 ntBASIC27.59■■■□□ 2.01
PCDHA2Q9Y5H9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHA2Q9Y5H9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHA2Q9Y5H9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHA2Q9Y5H9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHA2Q9Y5H9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
PCDHA2Q9Y5H9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.57■■■□□ 2
PCDHA2Q9Y5H9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHA2Q9Y5H9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHA2Q9Y5H9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
PCDHA2Q9Y5H9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.57■■■□□ 2
PCDHA2Q9Y5H9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
PCDHA2Q9Y5H9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.56■■■□□ 2
PCDHA2Q9Y5H9 AC004987.1-201ENST00000428627 508 ntBASIC27.56■■■□□ 2
PCDHA2Q9Y5H9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.56■■■□□ 2
PCDHA2Q9Y5H9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.56■■■□□ 2
PCDHA2Q9Y5H9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
PCDHA2Q9Y5H9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHA2Q9Y5H9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 AL449106.1-201ENST00000608517 1980 ntBASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 TSPY13P-201ENST00000338964 914 ntBASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA2Q9Y5H9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHA2Q9Y5H9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.54■■■□□ 2
PCDHA2Q9Y5H9 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.54■■■□□ 2
PCDHA2Q9Y5H9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 AC009831.1-201ENST00000580420 1582 ntBASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 ATP5G2P3-201ENST00000429083 425 ntBASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 AC133552.2-201ENST00000619106 1032 ntBASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHA2Q9Y5H9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PCDHA2Q9Y5H9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDHA2Q9Y5H9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■■□□ 2
PCDHA2Q9Y5H9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.51■■□□□ 1.99
PCDHA2Q9Y5H9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.51■■□□□ 1.99
PCDHA2Q9Y5H9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
PCDHA2Q9Y5H9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHA2Q9Y5H9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
PCDHA2Q9Y5H9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
PCDHA2Q9Y5H9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHA2Q9Y5H9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHA2Q9Y5H9 WHAMMP3-201ENST00000611636 1609 ntBASIC27.5■■□□□ 1.99
PCDHA2Q9Y5H9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.49■■□□□ 1.99
PCDHA2Q9Y5H9 AL592293.1-201ENST00000502889 1188 ntBASIC27.49■■□□□ 1.99
PCDHA2Q9Y5H9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA2Q9Y5H9 AC026202.3-201ENST00000600805 1127 ntBASIC27.49■■□□□ 1.99
PCDHA2Q9Y5H9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA2Q9Y5H9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA2Q9Y5H9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.48■■□□□ 1.99
PCDHA2Q9Y5H9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
PCDHA2Q9Y5H9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA2Q9Y5H9 RP9P-202ENST00000450133 1212 ntBASIC27.47■■□□□ 1.99
PCDHA2Q9Y5H9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PCDHA2Q9Y5H9 AC129492.7-201ENST00000622992 756 ntBASIC27.47■■□□□ 1.99
PCDHA2Q9Y5H9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHA2Q9Y5H9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHA2Q9Y5H9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms