Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CD248Q9HCU0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.52■■□□□ 1.68
CD248Q9HCU0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CD248Q9HCU0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CD248Q9HCU0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CD248Q9HCU0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.52■■□□□ 1.68
CD248Q9HCU0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.51■■□□□ 1.67
CD248Q9HCU0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.51■■□□□ 1.67
CD248Q9HCU0 DRD5P2-201ENST00000421395 2012 ntBASIC25.51■■□□□ 1.67
CD248Q9HCU0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD248Q9HCU0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.51■■□□□ 1.67
CD248Q9HCU0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD248Q9HCU0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD248Q9HCU0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CD248Q9HCU0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.5■■□□□ 1.67
CD248Q9HCU0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.5■■□□□ 1.67
CD248Q9HCU0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.49■■□□□ 1.67
CD248Q9HCU0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.49■■□□□ 1.67
CD248Q9HCU0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.49■■□□□ 1.67
CD248Q9HCU0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.49■■□□□ 1.67
CD248Q9HCU0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CD248Q9HCU0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.49■■□□□ 1.67
CD248Q9HCU0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CD248Q9HCU0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.49■■□□□ 1.67
CD248Q9HCU0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.48■■□□□ 1.67
CD248Q9HCU0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
CD248Q9HCU0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CD248Q9HCU0 KRT18P60-201ENST00000312876 1297 ntBASIC25.48■■□□□ 1.67
CD248Q9HCU0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CD248Q9HCU0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CD248Q9HCU0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CD248Q9HCU0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CD248Q9HCU0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CD248Q9HCU0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CD248Q9HCU0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CD248Q9HCU0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.46■■□□□ 1.67
CD248Q9HCU0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.46■■□□□ 1.67
CD248Q9HCU0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CD248Q9HCU0 AC126177.7-201ENST00000547904 679 ntBASIC25.46■■□□□ 1.67
CD248Q9HCU0 AL033527.3-201ENST00000566366 1196 ntBASIC25.46■■□□□ 1.67
CD248Q9HCU0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CD248Q9HCU0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CD248Q9HCU0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CD248Q9HCU0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.46■■□□□ 1.67
CD248Q9HCU0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CD248Q9HCU0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.45■■□□□ 1.67
CD248Q9HCU0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CD248Q9HCU0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CD248Q9HCU0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CD248Q9HCU0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
CD248Q9HCU0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.45■■□□□ 1.66
CD248Q9HCU0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CD248Q9HCU0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CD248Q9HCU0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CD248Q9HCU0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.44■■□□□ 1.66
CD248Q9HCU0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.44■■□□□ 1.66
CD248Q9HCU0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CD248Q9HCU0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CD248Q9HCU0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CD248Q9HCU0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.44■■□□□ 1.66
CD248Q9HCU0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CD248Q9HCU0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CD248Q9HCU0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.43■■□□□ 1.66
CD248Q9HCU0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CD248Q9HCU0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CD248Q9HCU0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CD248Q9HCU0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CD248Q9HCU0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CD248Q9HCU0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
CD248Q9HCU0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.41■■□□□ 1.66
CD248Q9HCU0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CD248Q9HCU0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.41■■□□□ 1.66
CD248Q9HCU0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CD248Q9HCU0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CD248Q9HCU0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CD248Q9HCU0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.41■■□□□ 1.66
CD248Q9HCU0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CD248Q9HCU0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CD248Q9HCU0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CD248Q9HCU0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.4■■□□□ 1.66
CD248Q9HCU0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CD248Q9HCU0 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.4■■□□□ 1.66
CD248Q9HCU0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CD248Q9HCU0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.39■■□□□ 1.66
CD248Q9HCU0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CD248Q9HCU0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
CD248Q9HCU0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CD248Q9HCU0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CD248Q9HCU0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CD248Q9HCU0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.38■■□□□ 1.65
CD248Q9HCU0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CD248Q9HCU0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CD248Q9HCU0 AC004987.1-201ENST00000428627 508 ntBASIC25.38■■□□□ 1.65
CD248Q9HCU0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.38■■□□□ 1.65
CD248Q9HCU0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.38■■□□□ 1.65
CD248Q9HCU0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CD248Q9HCU0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CD248Q9HCU0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.37■■□□□ 1.65
CD248Q9HCU0 AL139393.2-201ENST00000608721 2025 ntBASIC25.37■■□□□ 1.65
CD248Q9HCU0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms