Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC138932.3-201ENST00000567634 1902 ntBASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM4Q8WVI0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 AC022211.4-201ENST00000625094 2161 ntBASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 AC133561.1-201ENST00000568600 2415 ntBASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM4Q8WVI0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM4Q8WVI0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM4Q8WVI0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
SMIM4Q8WVI0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM4Q8WVI0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM4Q8WVI0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.95■□□□□ 0.94
SMIM4Q8WVI0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM4Q8WVI0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM4Q8WVI0 AC012676.1-201ENST00000574705 1949 ntBASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM4Q8WVI0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM4Q8WVI0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM4Q8WVI0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM4Q8WVI0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.92■□□□□ 0.94
SMIM4Q8WVI0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.92■□□□□ 0.94
SMIM4Q8WVI0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM4Q8WVI0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM4Q8WVI0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM4Q8WVI0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM4Q8WVI0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM4Q8WVI0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM4Q8WVI0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMIM4Q8WVI0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.89■□□□□ 0.93
SMIM4Q8WVI0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.89■□□□□ 0.93
SMIM4Q8WVI0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SMIM4Q8WVI0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM4Q8WVI0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM4Q8WVI0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM4Q8WVI0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM4Q8WVI0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM4Q8WVI0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM4Q8WVI0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM4Q8WVI0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM4Q8WVI0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 AL391121.1-201ENST00000607967 1349 ntBASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM4Q8WVI0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM4Q8WVI0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM4Q8WVI0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM4Q8WVI0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.84■□□□□ 0.93
SMIM4Q8WVI0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM4Q8WVI0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.84■□□□□ 0.93
SMIM4Q8WVI0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM4Q8WVI0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMIM4Q8WVI0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SMIM4Q8WVI0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM4Q8WVI0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms