Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDND2Q8NHS1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDND2Q8NHS1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDND2Q8NHS1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDND2Q8NHS1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDND2Q8NHS1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDND2Q8NHS1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.77■□□□□ 0.92
CLDND2Q8NHS1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDND2Q8NHS1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CLDND2Q8NHS1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CLDND2Q8NHS1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDND2Q8NHS1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLDND2Q8NHS1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDND2Q8NHS1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDND2Q8NHS1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDND2Q8NHS1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDND2Q8NHS1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDND2Q8NHS1 SMPD5-203ENST00000639008 1464 ntBASIC20.75■□□□□ 0.91
CLDND2Q8NHS1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLDND2Q8NHS1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDND2Q8NHS1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.75■□□□□ 0.91
CLDND2Q8NHS1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDND2Q8NHS1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDND2Q8NHS1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDND2Q8NHS1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDND2Q8NHS1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDND2Q8NHS1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDND2Q8NHS1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDND2Q8NHS1 TSPY13P-201ENST00000338964 914 ntBASIC20.72■□□□□ 0.91
CLDND2Q8NHS1 AC004987.1-201ENST00000428627 508 ntBASIC20.72■□□□□ 0.91
CLDND2Q8NHS1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDND2Q8NHS1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDND2Q8NHS1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDND2Q8NHS1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDND2Q8NHS1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 AC133552.2-201ENST00000619106 1032 ntBASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 AC009831.1-201ENST00000580420 1582 ntBASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDND2Q8NHS1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDND2Q8NHS1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDND2Q8NHS1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDND2Q8NHS1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDND2Q8NHS1 AC025884.2-201ENST00000553429 711 ntBASIC20.69■□□□□ 0.9
CLDND2Q8NHS1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDND2Q8NHS1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 AL592293.1-201ENST00000502889 1188 ntBASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDND2Q8NHS1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLDND2Q8NHS1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDND2Q8NHS1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDND2Q8NHS1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLDND2Q8NHS1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDND2Q8NHS1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDND2Q8NHS1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDND2Q8NHS1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLDND2Q8NHS1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CLDND2Q8NHS1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDND2Q8NHS1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDND2Q8NHS1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 RP9P-202ENST00000450133 1212 ntBASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 AC026202.3-201ENST00000600805 1127 ntBASIC20.65■□□□□ 0.9
CLDND2Q8NHS1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLDND2Q8NHS1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDND2Q8NHS1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLDND2Q8NHS1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDND2Q8NHS1 AC129492.7-201ENST00000622992 756 ntBASIC20.64■□□□□ 0.89
CLDND2Q8NHS1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDND2Q8NHS1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDND2Q8NHS1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms