Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM116Q8NCL8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM116Q8NCL8 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM116Q8NCL8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM116Q8NCL8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM116Q8NCL8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM116Q8NCL8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 DUX4L11-201ENST00000611504 1267 ntBASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 DUX4L12-201ENST00000614593 1267 ntBASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 DUX4L14-201ENST00000621227 1267 ntBASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM116Q8NCL8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L13-201ENST00000554103 1267 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L15-201ENST00000611059 1267 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L23-201ENST00000615195 1269 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L24-201ENST00000617576 1269 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L22-201ENST00000618238 1269 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L20-201ENST00000619712 1269 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L21-201ENST00000622058 1269 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L10-201ENST00000622460 1267 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 DUX4L25-201ENST00000624915 1269 ntBASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM116Q8NCL8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 AC020928.2-201ENST00000588717 2197 ntBASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM116Q8NCL8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM116Q8NCL8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM116Q8NCL8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM116Q8NCL8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TMEM116Q8NCL8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM116Q8NCL8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM116Q8NCL8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM116Q8NCL8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 AC008813.1-201ENST00000536597 885 ntBASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TMEM116Q8NCL8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM116Q8NCL8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM116Q8NCL8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM116Q8NCL8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM116Q8NCL8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEM116Q8NCL8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM116Q8NCL8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms