Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 YLL066CYLL066C 3618 nt6.95□□□□□ -1.3
RFX1P48743 GSH1YJL101C 2037 nt6.94□□□□□ -1.3
RFX1P48743 MCH2YKL221W 1422 nt6.94□□□□□ -1.3
RFX1P48743 ERS1YCR075C 783 nt6.94□□□□□ -1.3
RFX1P48743 CBR1YIL043C 855 nt6.94□□□□□ -1.3
RFX1P48743 NPL6YMR091C 1308 nt6.94□□□□□ -1.3
RFX1P48743 LIA1YJR070C 978 nt6.93□□□□□ -1.3
RFX1P48743 TOS2YGR221C 1869 nt6.93□□□□□ -1.3
RFX1P48743 SEC62YPL094C 825 nt6.92□□□□□ -1.3
RFX1P48743 UTP6YDR449C 1323 nt6.92□□□□□ -1.3
RFX1P48743 YMR034CYMR034C 1305 nt6.92□□□□□ -1.3
RFX1P48743 ECM38YLR299W 1983 nt6.91□□□□□ -1.3
RFX1P48743 PAC2YER007W 1557 nt6.91□□□□□ -1.3
RFX1P48743 YKR023WYKR023W 1593 nt6.91□□□□□ -1.3
RFX1P48743 FMP40YPL222W 2067 nt6.91□□□□□ -1.3
RFX1P48743 GPD1YDL022W 1176 nt6.91□□□□□ -1.3
RFX1P48743 RPL2BYIL018W 765 nt6.91□□□□□ -1.3
RFX1P48743 BMT5YIL096C 1011 nt6.91□□□□□ -1.3
RFX1P48743 RDN5-2RDN5-2 119 nt6.91□□□□□ -1.3
RFX1P48743 RDN5-3RDN5-3 119 nt6.91□□□□□ -1.3
RFX1P48743 RDN5-4RDN5-4 119 nt6.91□□□□□ -1.3
RFX1P48743 RDN5-5RDN5-5 119 nt6.91□□□□□ -1.3
RFX1P48743 SCO2YBR024W 906 nt6.91□□□□□ -1.3
RFX1P48743 GUT1YHL032C 2130 nt6.91□□□□□ -1.3
RFX1P48743 EHD3YDR036C 1503 nt6.91□□□□□ -1.3
RFX1P48743 YDL177CYDL177C 513 nt6.9□□□□□ -1.3
RFX1P48743 HED1YDR014W-A 489 nt6.9□□□□□ -1.3
RFX1P48743 MRPL35YDR322W 1104 nt6.9□□□□□ -1.3
RFX1P48743 TRS31YDR472W 852 nt6.9□□□□□ -1.3
RFX1P48743 FPR2YDR519W 408 nt6.9□□□□□ -1.3
RFX1P48743 YMR147WYMR147W 672 nt6.9□□□□□ -1.3
RFX1P48743 YBR241CYBR241C 1467 nt6.9□□□□□ -1.31
RFX1P48743 FCY22YER060W-A 1593 nt6.9□□□□□ -1.31
RFX1P48743 HBN1YCL026C-B 582 nt6.89□□□□□ -1.31
RFX1P48743 APM1YPL259C 1428 nt6.89□□□□□ -1.31
RFX1P48743 HSM3YBR272C 1443 nt6.89□□□□□ -1.31
RFX1P48743 GLN3YER040W 2193 nt6.89□□□□□ -1.31
RFX1P48743 CTF8YHR191C 402 nt6.88□□□□□ -1.31
RFX1P48743 YKL018C-AYKL018C-A 300 nt6.88□□□□□ -1.31
RFX1P48743 TMA46YOR091W 1038 nt6.88□□□□□ -1.31
RFX1P48743 BDF2YDL070W 1917 nt6.88□□□□□ -1.31
RFX1P48743 VMA2YBR127C 1554 nt6.87□□□□□ -1.31
RFX1P48743 YSC83YHR017W 1158 nt6.87□□□□□ -1.31
RFX1P48743 SWD1YAR003W 1281 nt6.87□□□□□ -1.31
RFX1P48743 CCT3YJL014W 1605 nt6.87□□□□□ -1.31
RFX1P48743 CRH1YGR189C 1524 nt6.86□□□□□ -1.31
RFX1P48743 TAH11YJR046W 1815 nt6.86□□□□□ -1.31
RFX1P48743 YOR111WYOR111W 699 nt6.86□□□□□ -1.31
RFX1P48743 OPI11YPR044C 354 nt6.86□□□□□ -1.31
RFX1P48743 HEL1YKR017C 1656 nt6.86□□□□□ -1.31
RFX1P48743 RGD2YFL047W 2145 nt6.86□□□□□ -1.31
RFX1P48743 DOT1YDR440W 1749 nt6.85□□□□□ -1.31
RFX1P48743 YHR020WYHR020W 2067 nt6.85□□□□□ -1.31
RFX1P48743 YFL013W-AYFL013W-A 804 nt6.85□□□□□ -1.31
RFX1P48743 PPM2YOL141W 2088 nt6.85□□□□□ -1.31
RFX1P48743 HSP12YFL014W 330 nt6.84□□□□□ -1.31
RFX1P48743 LCL3YGL085W 825 nt6.84□□□□□ -1.31
RFX1P48743 YNL092WYNL092W 1203 nt6.84□□□□□ -1.31
RFX1P48743 LSC1YOR142W 990 nt6.84□□□□□ -1.31
RFX1P48743 YHR145CYHR145C 357 nt6.83□□□□□ -1.32
RFX1P48743 YKL102CYKL102C 306 nt6.83□□□□□ -1.32
RFX1P48743 SIR2YDL042C 1689 nt6.83□□□□□ -1.32
RFX1P48743 UBP13YBL067C 2244 nt6.82□□□□□ -1.32
RFX1P48743 ARP3YJR065C 1350 nt6.82□□□□□ -1.32
RFX1P48743 GTT3YEL017W 1014 nt6.82□□□□□ -1.32
RFX1P48743 ASF1YJL115W 840 nt6.82□□□□□ -1.32
RFX1P48743 ATG36YJL185C 882 nt6.82□□□□□ -1.32
RFX1P48743 IRC11YOR013W 471 nt6.82□□□□□ -1.32
RFX1P48743 YJL107CYJL107C 1164 nt6.81□□□□□ -1.32
RFX1P48743 YKL077WYKL077W 1179 nt6.81□□□□□ -1.32
RFX1P48743 RNH1YMR234W 1047 nt6.81□□□□□ -1.32
RFX1P48743 YBR113WYBR113W 483 nt6.81□□□□□ -1.32
RFX1P48743 COQ1YBR003W 1422 nt6.81□□□□□ -1.32
RFX1P48743 ARP10YDR106W 855 nt6.8□□□□□ -1.32
RFX1P48743 SEM1YDR363W-A 270 nt6.8□□□□□ -1.32
RFX1P48743 FMO1YHR176W 1299 nt6.8□□□□□ -1.32
RFX1P48743 HMS2YJR147W 1077 nt6.8□□□□□ -1.32
RFX1P48743 SUR7YML052W 909 nt6.8□□□□□ -1.32
RFX1P48743 TAF9YMR236W 474 nt6.8□□□□□ -1.32
RFX1P48743 YNR014WYNR014W 639 nt6.8□□□□□ -1.32
RFX1P48743 SAL1YNL083W 1485 nt6.79□□□□□ -1.32
RFX1P48743 MRPS18YNL306W 654 nt6.79□□□□□ -1.32
RFX1P48743 SLA2YNL243W 2907 nt6.79□□□□□ -1.32
RFX1P48743 PPH22YDL188C 1134 nt6.78□□□□□ -1.32
RFX1P48743 MRPL23YOR150W 492 nt6.78□□□□□ -1.32
RFX1P48743 RSM23YGL129C 1353 nt6.78□□□□□ -1.32
RFX1P48743 COX10YPL172C 1389 nt6.78□□□□□ -1.32
RFX1P48743 AVT4YNL101W 2142 nt6.77□□□□□ -1.33
RFX1P48743 SNU71YGR013W 1863 nt6.77□□□□□ -1.33
RFX1P48743 STT3YGL022W 2157 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)BtG(GCC)B 71 nt6.77□□□□□ -1.33
RFX1P48743 SUF16tG(GCC)C 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)D1tG(GCC)D1 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)D2tG(GCC)D2 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)EtG(GCC)E 71 nt6.77□□□□□ -1.33
RFX1P48743 SUF20tG(GCC)F1 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)F2tG(GCC)F2 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)G1tG(GCC)G1 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)G2tG(GCC)G2 71 nt6.77□□□□□ -1.33
RFX1P48743 tG(GCC)J1tG(GCC)J1 71 nt6.77□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms