Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 YPL247CYPL247C 1572 nt6.69□□□□□ -1.34
UPF3P48412 MSN2YMR037C 2115 nt6.68□□□□□ -1.34
UPF3P48412 VPS72YDR485C 2388 nt6.68□□□□□ -1.34
UPF3P48412 DAL4YIR028W 1908 nt6.68□□□□□ -1.34
UPF3P48412 KNS1YLL019C 2214 nt6.68□□□□□ -1.34
UPF3P48412 GPH1YPR160W 2709 nt6.68□□□□□ -1.34
UPF3P48412 PDA1YER178W 1263 nt6.68□□□□□ -1.34
UPF3P48412 PLB2YMR006C 2121 nt6.67□□□□□ -1.34
UPF3P48412 PRS4YBL068W 981 nt6.67□□□□□ -1.34
UPF3P48412 GET4YOR164C 939 nt6.67□□□□□ -1.34
UPF3P48412 snR30snR30 606 nt6.67□□□□□ -1.34
UPF3P48412 GSH1YJL101C 2037 nt6.67□□□□□ -1.34
UPF3P48412 BPL1YDL141W 2073 nt6.67□□□□□ -1.34
UPF3P48412 ECM30YLR436C 3825 nt6.67□□□□□ -1.34
UPF3P48412 GYP8YFL027C 1494 nt6.66□□□□□ -1.34
UPF3P48412 YBL070CYBL070C 321 nt6.66□□□□□ -1.34
UPF3P48412 EMW1YNL313C 2715 nt6.65□□□□□ -1.34
UPF3P48412 YOX1YML027W 1158 nt6.65□□□□□ -1.34
UPF3P48412 AVO2YMR068W 1281 nt6.65□□□□□ -1.34
UPF3P48412 YOL099CYOL099C 492 nt6.65□□□□□ -1.34
UPF3P48412 YCL049CYCL049C 939 nt6.65□□□□□ -1.34
UPF3P48412 HOG1YLR113W 1308 nt6.65□□□□□ -1.35
UPF3P48412 TUF1YOR187W 1314 nt6.65□□□□□ -1.35
UPF3P48412 YMR027WYMR027W 1413 nt6.65□□□□□ -1.35
UPF3P48412 RQC1YDR333C 2172 nt6.65□□□□□ -1.35
UPF3P48412 BRN1YBL097W 2265 nt6.65□□□□□ -1.35
UPF3P48412 PAC2YER007W 1557 nt6.65□□□□□ -1.35
UPF3P48412 YDL023CYDL023C 321 nt6.64□□□□□ -1.35
UPF3P48412 TRS31YDR472W 852 nt6.64□□□□□ -1.35
UPF3P48412 TOM20YGR082W 552 nt6.64□□□□□ -1.35
UPF3P48412 RPL2BYIL018W 765 nt6.64□□□□□ -1.35
UPF3P48412 REV7YIL139C 738 nt6.64□□□□□ -1.35
UPF3P48412 RDN5-2RDN5-2 119 nt6.64□□□□□ -1.35
UPF3P48412 RDN5-3RDN5-3 119 nt6.64□□□□□ -1.35
UPF3P48412 RDN5-4RDN5-4 119 nt6.64□□□□□ -1.35
UPF3P48412 RDN5-5RDN5-5 119 nt6.64□□□□□ -1.35
UPF3P48412 YPR130CYPR130C 408 nt6.64□□□□□ -1.35
UPF3P48412 YBR241CYBR241C 1467 nt6.64□□□□□ -1.35
UPF3P48412 VBA5YKR105C 1749 nt6.64□□□□□ -1.35
UPF3P48412 SLA2YNL243W 2907 nt6.63□□□□□ -1.35
UPF3P48412 TRR2YHR106W 1029 nt6.63□□□□□ -1.35
UPF3P48412 YNR014WYNR014W 639 nt6.63□□□□□ -1.35
UPF3P48412 TFB4YPR056W 1017 nt6.63□□□□□ -1.35
UPF3P48412 MEU1YLR017W 1014 nt6.62□□□□□ -1.35
UPF3P48412 NTG2YOL043C 1143 nt6.62□□□□□ -1.35
UPF3P48412 SPG5YMR191W 1122 nt6.61□□□□□ -1.35
UPF3P48412 ZIM17YNL310C 525 nt6.61□□□□□ -1.35
UPF3P48412 HTZ1YOL012C 405 nt6.61□□□□□ -1.35
UPF3P48412 ATG7YHR171W 1893 nt6.61□□□□□ -1.35
UPF3P48412 IRS4YKR019C 1848 nt6.61□□□□□ -1.35
UPF3P48412 PMT3YOR321W 2262 nt6.6□□□□□ -1.35
UPF3P48412 RIX7YLL034C 2514 nt6.6□□□□□ -1.35
UPF3P48412 APE4YHR113W 1473 nt6.6□□□□□ -1.35
UPF3P48412 YLL058WYLL058W 1728 nt6.59□□□□□ -1.35
UPF3P48412 PPH22YDL188C 1134 nt6.59□□□□□ -1.35
UPF3P48412 YIR020W-AYIR020W-A 243 nt6.59□□□□□ -1.35
UPF3P48412 COX16YJL003W 357 nt6.59□□□□□ -1.35
UPF3P48412 SML1YML058W 315 nt6.59□□□□□ -1.35
UPF3P48412 YNR005CYNR005C 405 nt6.59□□□□□ -1.35
UPF3P48412 SEC18YBR080C 2277 nt6.59□□□□□ -1.36
UPF3P48412 RGD2YFL047W 2145 nt6.58□□□□□ -1.36
UPF3P48412 CIA1YDR267C 993 nt6.58□□□□□ -1.36
UPF3P48412 REC107YJR021C 945 nt6.58□□□□□ -1.36
UPF3P48412 EMP65YER140W 1671 nt6.58□□□□□ -1.36
UPF3P48412 PTC7YHR076W 1032 nt6.57□□□□□ -1.36
UPF3P48412 MCP1YOR228C 909 nt6.57□□□□□ -1.36
UPF3P48412 OPI11YPR044C 354 nt6.57□□□□□ -1.36
UPF3P48412 YLL066CYLL066C 3618 nt6.56□□□□□ -1.36
UPF3P48412 SKY1YMR216C 2229 nt6.56□□□□□ -1.36
UPF3P48412 YFL013W-AYFL013W-A 804 nt6.56□□□□□ -1.36
UPF3P48412 HMS2YJR147W 1077 nt6.56□□□□□ -1.36
UPF3P48412 YLR162WYLR162W 357 nt6.56□□□□□ -1.36
UPF3P48412 RRN10YBL025W 438 nt6.56□□□□□ -1.36
UPF3P48412 YNL247WYNL247W 2304 nt6.56□□□□□ -1.36
UPF3P48412 AVO1YOL078W 3531 nt6.56□□□□□ -1.36
UPF3P48412 APM4YOL062C 1476 nt6.55□□□□□ -1.36
UPF3P48412 GUS1YGL245W 2127 nt6.55□□□□□ -1.36
UPF3P48412 MRPS28YDR337W 861 nt6.55□□□□□ -1.36
UPF3P48412 YSC83YHR017W 1158 nt6.55□□□□□ -1.36
UPF3P48412 COS10YNR075W 1125 nt6.55□□□□□ -1.36
UPF3P48412 SMK1YPR054W 1167 nt6.55□□□□□ -1.36
UPF3P48412 NTE1YML059C 5040 nt6.55□□□□□ -1.36
UPF3P48412 YMR034CYMR034C 1305 nt6.54□□□□□ -1.36
UPF3P48412 YDL177CYDL177C 513 nt6.54□□□□□ -1.36
UPF3P48412 OPI8YKR035C 642 nt6.54□□□□□ -1.36
UPF3P48412 RPL31BYLR406C 342 nt6.54□□□□□ -1.36
UPF3P48412 YNL067W-AYNL067W-A 147 nt6.54□□□□□ -1.36
UPF3P48412 SRP101YDR292C 1866 nt6.53□□□□□ -1.36
UPF3P48412 AIM46YHR199C 933 nt6.53□□□□□ -1.36
UPF3P48412 URA1YKL216W 945 nt6.53□□□□□ -1.36
UPF3P48412 ERG10YPL028W 1197 nt6.53□□□□□ -1.36
UPF3P48412 HIS1YER055C 894 nt6.52□□□□□ -1.37
UPF3P48412 QCR6YFR033C 444 nt6.52□□□□□ -1.37
UPF3P48412 CBR1YIL043C 855 nt6.52□□□□□ -1.37
UPF3P48412 YJL144WYJL144W 315 nt6.52□□□□□ -1.37
UPF3P48412 TPK1YJL164C 1194 nt6.52□□□□□ -1.37
UPF3P48412 JJJ3YJR097W 519 nt6.52□□□□□ -1.37
UPF3P48412 GCN3YKR026C 918 nt6.52□□□□□ -1.37
UPF3P48412 FIT2YOR382W 462 nt6.52□□□□□ -1.37
UPF3P48412 RPL5YPL131W 894 nt6.52□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 43.8 ms