Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 tG(GCC)BtG(GCC)B 71 nt4.92□□□□□ -1.62
VTC1P40046 SUF16tG(GCC)C 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)D1tG(GCC)D1 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)D2tG(GCC)D2 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)EtG(GCC)E 71 nt4.92□□□□□ -1.62
VTC1P40046 SUF20tG(GCC)F1 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)F2tG(GCC)F2 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)G1tG(GCC)G1 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)G2tG(GCC)G2 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)J1tG(GCC)J1 71 nt4.92□□□□□ -1.62
VTC1P40046 SUF23tG(GCC)J2 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)MtG(GCC)M 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)O1tG(GCC)O1 71 nt4.92□□□□□ -1.62
VTC1P40046 SUF17tG(GCC)O2 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)P1tG(GCC)P1 71 nt4.92□□□□□ -1.62
VTC1P40046 tG(GCC)P2tG(GCC)P2 71 nt4.92□□□□□ -1.62
VTC1P40046 YML122CYML122C 381 nt4.92□□□□□ -1.62
VTC1P40046 RTC4YNL254C 1206 nt4.92□□□□□ -1.62
VTC1P40046 PAU21YOR394W 495 nt4.92□□□□□ -1.62
VTC1P40046 PAU22YPL282C 495 nt4.92□□□□□ -1.62
VTC1P40046 YDL177CYDL177C 513 nt4.91□□□□□ -1.62
VTC1P40046 PPM1YDR435C 987 nt4.91□□□□□ -1.62
VTC1P40046 YSC83YHR017W 1158 nt4.91□□□□□ -1.62
VTC1P40046 DUS4YLR405W 1104 nt4.91□□□□□ -1.62
VTC1P40046 SPG5YMR191W 1122 nt4.91□□□□□ -1.62
VTC1P40046 CDC16YKL022C 2523 nt4.91□□□□□ -1.62
VTC1P40046 HXT15YDL245C 1704 nt4.91□□□□□ -1.62
VTC1P40046 HXT16YJR158W 1704 nt4.91□□□□□ -1.62
VTC1P40046 TUB1YML085C 1344 nt4.91□□□□□ -1.62
VTC1P40046 CRP1YHR146W 1398 nt4.91□□□□□ -1.62
VTC1P40046 NMT1YLR195C 1368 nt4.91□□□□□ -1.62
VTC1P40046 PFK2YMR205C 2880 nt4.9□□□□□ -1.62
VTC1P40046 FRE5YOR384W 2085 nt4.9□□□□□ -1.62
VTC1P40046 YPT1YFL038C 621 nt4.9□□□□□ -1.63
VTC1P40046 tL(UAA)B1tL(UAA)B1 84 nt4.9□□□□□ -1.63
VTC1P40046 tL(UAA)B2tL(UAA)B2 84 nt4.9□□□□□ -1.63
VTC1P40046 tL(UAA)DtL(UAA)D 84 nt4.9□□□□□ -1.63
VTC1P40046 SUP51tL(UAA)J 84 nt4.9□□□□□ -1.63
VTC1P40046 tL(UAA)KtL(UAA)K 84 nt4.9□□□□□ -1.63
VTC1P40046 tL(UAA)LtL(UAA)L 84 nt4.9□□□□□ -1.63
VTC1P40046 tL(UAA)NtL(UAA)N 84 nt4.9□□□□□ -1.63
VTC1P40046 RPL31BYLR406C 342 nt4.9□□□□□ -1.63
VTC1P40046 YBR113WYBR113W 483 nt4.9□□□□□ -1.63
VTC1P40046 ATG22YCL038C 1587 nt4.9□□□□□ -1.63
VTC1P40046 RRP46YGR095C 672 nt4.89□□□□□ -1.63
VTC1P40046 YNL017CYNL017C 339 nt4.89□□□□□ -1.63
VTC1P40046 PET494YNR045W 1470 nt4.88□□□□□ -1.63 RIP-Chip
VTC1P40046 STB5YHR178W 2232 nt4.88□□□□□ -1.63
VTC1P40046 NCA3YJL116C 1014 nt4.88□□□□□ -1.63
VTC1P40046 FBA1YKL060C 1080 nt4.88□□□□□ -1.63
VTC1P40046 YLR312CYLR312C 1197 nt4.88□□□□□ -1.63
VTC1P40046 MOD5YOR274W 1287 nt4.88□□□□□ -1.63
VTC1P40046 YOR343CYOR343C 327 nt4.88□□□□□ -1.63
VTC1P40046 MPE1YKL059C 1326 nt4.88□□□□□ -1.63
VTC1P40046 STT3YGL022W 2157 nt4.88□□□□□ -1.63
VTC1P40046 RMD9YGL107C 1941 nt4.87□□□□□ -1.63
VTC1P40046 KTR5YNL029C 1569 nt4.87□□□□□ -1.63
VTC1P40046 snR82snR82 268 nt4.87□□□□□ -1.63
VTC1P40046 REC107YJR021C 945 nt4.87□□□□□ -1.63
VTC1P40046 DFR1YOR236W 636 nt4.87□□□□□ -1.63
VTC1P40046 POP1YNL221C 2628 nt4.87□□□□□ -1.63 RIP-Chip
VTC1P40046 NFS1YCL017C 1494 nt4.87□□□□□ -1.63
VTC1P40046 ESC8YOL017W 2145 nt4.87□□□□□ -1.63
VTC1P40046 GAA1YLR088W 1845 nt4.86□□□□□ -1.63 RIP-Chip
VTC1P40046 GPI11YDR302W 660 nt4.86□□□□□ -1.63
VTC1P40046 DML1YMR211W 1428 nt4.86□□□□□ -1.63
VTC1P40046 YDR514CYDR514C 1452 nt4.86□□□□□ -1.63
VTC1P40046 RSA4YCR072C 1548 nt4.86□□□□□ -1.63
VTC1P40046 RIX7YLL034C 2514 nt4.85□□□□□ -1.63
VTC1P40046 DOC1YGL240W 753 nt4.85□□□□□ -1.63
VTC1P40046 ERP2YAL007C 648 nt4.85□□□□□ -1.63
VTC1P40046 YLR358CYLR358C 564 nt4.85□□□□□ -1.63
VTC1P40046 SQT1YIR012W 1296 nt4.84□□□□□ -1.63
VTC1P40046 OAC1YKL120W 975 nt4.84□□□□□ -1.63
VTC1P40046 YLR123CYLR123C 330 nt4.84□□□□□ -1.63
VTC1P40046 EMW1YNL313C 2715 nt4.84□□□□□ -1.63
VTC1P40046 CHS5YLR330W 2016 nt4.84□□□□□ -1.64
VTC1P40046 SLX5YDL013W 1860 nt4.83□□□□□ -1.64
VTC1P40046 HXT17YNR072W 1695 nt4.83□□□□□ -1.64
VTC1P40046 GDA1YEL042W 1557 nt4.83□□□□□ -1.64
VTC1P40046 YFL052WYFL052W 1398 nt4.83□□□□□ -1.64
VTC1P40046 THI2YBR240C 1353 nt4.83□□□□□ -1.64
VTC1P40046 COX9YDL067C 180 nt4.83□□□□□ -1.64
VTC1P40046 RPP1YHR062C 882 nt4.83□□□□□ -1.64
VTC1P40046 YHR020WYHR020W 2067 nt4.82□□□□□ -1.64
VTC1P40046 MSY1YPL097W 1479 nt4.82□□□□□ -1.64
VTC1P40046 SPS22YCL048W 1392 nt4.82□□□□□ -1.64
VTC1P40046 YMR034CYMR034C 1305 nt4.82□□□□□ -1.64 RIP-Chip
VTC1P40046 IRS4YKR019C 1848 nt4.82□□□□□ -1.64
VTC1P40046 VPS61YDR136C 573 nt4.82□□□□□ -1.64
VTC1P40046 YAL016C-AYAL016C-A 315 nt4.82□□□□□ -1.64
VTC1P40046 MIA40YKL195W 1212 nt4.82□□□□□ -1.64
VTC1P40046 EDE1YBL047C 4146 nt4.82□□□□□ -1.64
VTC1P40046 CMR1YDL156W 1569 nt4.82□□□□□ -1.64
VTC1P40046 BRN1YBL097W 2265 nt4.81□□□□□ -1.64
VTC1P40046 RSC2YLR357W 2670 nt4.81□□□□□ -1.64
VTC1P40046 YGR127WYGR127W 939 nt4.81□□□□□ -1.64
VTC1P40046 ICT1YLR099C 1185 nt4.81□□□□□ -1.64
VTC1P40046 NTG2YOL043C 1143 nt4.81□□□□□ -1.64
VTC1P40046 NME1NME1 340 nt4.81□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 110.7 ms