Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HMGN1P05114 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGN1P05114 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGN1P05114 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGN1P05114 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HMGN1P05114 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGN1P05114 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGN1P05114 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.09■■□□□ 1.13
HMGN1P05114 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HMGN1P05114 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.08■■□□□ 1.13
HMGN1P05114 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGN1P05114 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
HMGN1P05114 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HMGN1P05114 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
HMGN1P05114 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGN1P05114 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGN1P05114 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
HMGN1P05114 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGN1P05114 AC010501.1-201ENST00000606270 1962 ntBASIC22.07■■□□□ 1.12
HMGN1P05114 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
HMGN1P05114 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGN1P05114 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGN1P05114 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGN1P05114 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGN1P05114 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
HMGN1P05114 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
HMGN1P05114 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.05■■□□□ 1.12
HMGN1P05114 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.05■■□□□ 1.12
HMGN1P05114 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGN1P05114 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
HMGN1P05114 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGN1P05114 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGN1P05114 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGN1P05114 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HMGN1P05114 AL162393.1-201ENST00000437852 946 ntBASIC22.04■■□□□ 1.12
HMGN1P05114 AC021231.2-201ENST00000594613 730 ntBASIC22.04■■□□□ 1.12
HMGN1P05114 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.04■■□□□ 1.12
HMGN1P05114 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 DUX4L29-201ENST00000425409 679 ntBASIC22.03■■□□□ 1.12
HMGN1P05114 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGN1P05114 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGN1P05114 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGN1P05114 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGN1P05114 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGN1P05114 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGN1P05114 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGN1P05114 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGN1P05114 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HMGN1P05114 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGN1P05114 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22■■□□□ 1.11
HMGN1P05114 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22■■□□□ 1.11
HMGN1P05114 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HMGN1P05114 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
HMGN1P05114 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGN1P05114 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGN1P05114 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGN1P05114 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGN1P05114 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
HMGN1P05114 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGN1P05114 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGN1P05114 ERN1-208ENST00000606895 2068 ntBASIC21.99■■□□□ 1.11
HMGN1P05114 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.98■■□□□ 1.11
HMGN1P05114 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGN1P05114 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGN1P05114 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGN1P05114 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGN1P05114 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGN1P05114 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
HMGN1P05114 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGN1P05114 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HMGN1P05114 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
HMGN1P05114 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGN1P05114 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGN1P05114 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGN1P05114 AC093323.1-202ENST00000635031 2045 ntBASIC21.97■■□□□ 1.11
HMGN1P05114 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.96■■□□□ 1.11
HMGN1P05114 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGN1P05114 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HMGN1P05114 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGN1P05114 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
HMGN1P05114 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGN1P05114 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGN1P05114 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGN1P05114 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.95■■□□□ 1.1
HMGN1P05114 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.95■■□□□ 1.1
HMGN1P05114 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGN1P05114 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
HMGN1P05114 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMGN1P05114 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGN1P05114 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGN1P05114 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HMGN1P05114 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGN1P05114 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HMGN1P05114 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms