Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.1■■□□□ 1.45
TRIM13O60858 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM13O60858 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM13O60858 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
TRIM13O60858 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
TRIM13O60858 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.08■■□□□ 1.45
TRIM13O60858 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM13O60858 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
TRIM13O60858 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.08■■□□□ 1.45
TRIM13O60858 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.08■■□□□ 1.45
TRIM13O60858 AC021231.2-201ENST00000594613 730 ntBASIC24.08■■□□□ 1.45
TRIM13O60858 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM13O60858 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM13O60858 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TRIM13O60858 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
TRIM13O60858 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM13O60858 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM13O60858 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM13O60858 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM13O60858 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM13O60858 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.07■■□□□ 1.44
TRIM13O60858 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TRIM13O60858 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TRIM13O60858 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
TRIM13O60858 AC010501.1-201ENST00000606270 1962 ntBASIC24.05■■□□□ 1.44
TRIM13O60858 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
TRIM13O60858 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM13O60858 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM13O60858 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM13O60858 ERN1-208ENST00000606895 2068 ntBASIC24.04■■□□□ 1.44
TRIM13O60858 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM13O60858 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM13O60858 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TRIM13O60858 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM13O60858 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM13O60858 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.02■■□□□ 1.44
TRIM13O60858 DUX4L29-201ENST00000425409 679 ntBASIC24.02■■□□□ 1.44
TRIM13O60858 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.02■■□□□ 1.44
TRIM13O60858 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.01■■□□□ 1.43
TRIM13O60858 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM13O60858 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM13O60858 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM13O60858 AC093323.1-202ENST00000635031 2045 ntBASIC24.01■■□□□ 1.43
TRIM13O60858 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM13O60858 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM13O60858 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIM13O60858 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24■■□□□ 1.43
TRIM13O60858 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
TRIM13O60858 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TRIM13O60858 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM13O60858 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM13O60858 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM13O60858 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.99■■□□□ 1.43
TRIM13O60858 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.99■■□□□ 1.43
TRIM13O60858 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
TRIM13O60858 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM13O60858 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM13O60858 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM13O60858 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM13O60858 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM13O60858 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM13O60858 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM13O60858 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM13O60858 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TRIM13O60858 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM13O60858 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM13O60858 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM13O60858 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM13O60858 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TRIM13O60858 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM13O60858 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.95■■□□□ 1.43
TRIM13O60858 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM13O60858 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM13O60858 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM13O60858 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM13O60858 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM13O60858 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM13O60858 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.94■■□□□ 1.42
TRIM13O60858 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.94■■□□□ 1.42
TRIM13O60858 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM13O60858 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM13O60858 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM13O60858 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM13O60858 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM13O60858 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TRIM13O60858 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TRIM13O60858 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TRIM13O60858 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM13O60858 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TRIM13O60858 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM13O60858 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM13O60858 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM13O60858 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM13O60858 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM13O60858 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM13O60858 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM13O60858 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM13O60858 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM13O60858 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM13O60858 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms