Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MEIS3P1A6NDR6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MEIS3P1A6NDR6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MEIS3P1A6NDR6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MEIS3P1A6NDR6 MIR6090-201ENST00000622481 60 ntBASIC20.86■□□□□ 0.93
MEIS3P1A6NDR6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MEIS3P1A6NDR6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MEIS3P1A6NDR6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MEIS3P1A6NDR6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MEIS3P1A6NDR6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MEIS3P1A6NDR6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MEIS3P1A6NDR6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MEIS3P1A6NDR6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MEIS3P1A6NDR6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MEIS3P1A6NDR6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MEIS3P1A6NDR6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.83■□□□□ 0.93
MEIS3P1A6NDR6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
MEIS3P1A6NDR6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MEIS3P1A6NDR6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.83■□□□□ 0.93
MEIS3P1A6NDR6 AC108673.1-201ENST00000510422 1159 ntBASIC20.83■□□□□ 0.93
MEIS3P1A6NDR6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MEIS3P1A6NDR6 AC005559.1-201ENST00000589661 871 ntBASIC20.82■□□□□ 0.92
MEIS3P1A6NDR6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MEIS3P1A6NDR6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.81■□□□□ 0.92
MEIS3P1A6NDR6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
MEIS3P1A6NDR6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MEIS3P1A6NDR6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MEIS3P1A6NDR6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MEIS3P1A6NDR6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.79■□□□□ 0.92
MEIS3P1A6NDR6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MEIS3P1A6NDR6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MEIS3P1A6NDR6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MEIS3P1A6NDR6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.78■□□□□ 0.92
MEIS3P1A6NDR6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MEIS3P1A6NDR6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MEIS3P1A6NDR6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MEIS3P1A6NDR6 WHAMMP3-201ENST00000611636 1609 ntBASIC20.78■□□□□ 0.92
MEIS3P1A6NDR6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 AC010501.1-201ENST00000606270 1962 ntBASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MEIS3P1A6NDR6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.77■□□□□ 0.91
MEIS3P1A6NDR6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MEIS3P1A6NDR6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 AC142381.3-201ENST00000568208 1670 ntBASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MEIS3P1A6NDR6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MEIS3P1A6NDR6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
MEIS3P1A6NDR6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MEIS3P1A6NDR6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.75■□□□□ 0.91
MEIS3P1A6NDR6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MEIS3P1A6NDR6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MEIS3P1A6NDR6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MEIS3P1A6NDR6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MEIS3P1A6NDR6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms