Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
BIVM-ERCC5R4GMW8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC29.39■■■□□ 2.29
BIVM-ERCC5R4GMW8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 IGHV3-52-201ENST00000519770 353 ntBASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 MYCLP1-201ENST00000372451 1075 ntBASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 AL645939.2-201ENST00000427340 991 ntBASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC116407.2-201ENST00000613639 860 ntBASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC093028.1-201ENST00000622998 982 ntBASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
BIVM-ERCC5R4GMW8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC022145.2-201ENST00000598203 171 ntBASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC29.37■■■□□ 2.29
BIVM-ERCC5R4GMW8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 DDT-204ENST00000404092 805 ntTSL 3 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 ACTL9-202ENST00000612068 1252 ntBASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
BIVM-ERCC5R4GMW8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 PAWRP1-201ENST00000451083 565 ntBASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC099522.2-201ENST00000607001 744 ntBASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 MED16-214ENST00000617672 554 ntTSL 5 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC29.35■■■□□ 2.29
BIVM-ERCC5R4GMW8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 ACTG1P14-201ENST00000446382 1122 ntBASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 MIR3197-201ENST00000582241 73 ntBASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 AC092919.2-201ENST00000623631 1645 ntBASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC29.34■■■□□ 2.29
BIVM-ERCC5R4GMW8 WIZP1-201ENST00000531444 2299 ntBASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
BIVM-ERCC5R4GMW8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms