Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 KRT18P65-201ENST00000439811 1286 ntBASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 LINC00167-201ENST00000530583 1419 ntBASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 AP002414.4-201ENST00000589764 1148 ntBASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 AC092329.2-201ENST00000598402 547 ntBASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 AL592071.1-201ENST00000611956 408 ntBASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLCA3PQ9Y6N3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 REXO1L9P-201ENST00000604264 2108 ntBASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 HCG4P8-203ENST00000443049 980 ntBASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 VENTXP7-201ENST00000475503 772 ntBASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 AC011840.4-201ENST00000578471 627 ntBASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 AC092119.3-201ENST00000612618 583 ntBASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLCA3PQ9Y6N3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.83■□□□□ 0.29
CLCA3PQ9Y6N3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CLCA3PQ9Y6N3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms