Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 TSPY17P-201ENST00000450329 467 ntBASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
AP4B1Q9Y6B7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4B1Q9Y6B7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 ECEL1P3-201ENST00000427961 737 ntBASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4B1Q9Y6B7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP4B1Q9Y6B7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4B1Q9Y6B7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms