Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 AC010460.3-201ENST00000511359 1579 ntBASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 AL353593.2-201ENST00000602529 1483 ntBASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 CNN2P2-201ENST00000443536 909 ntBASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 CNN2P3-201ENST00000450201 906 ntBASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 OR7E47P-204ENST00000575924 449 ntBASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 AL136317.3-201ENST00000618497 906 ntBASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H4Q9UPT8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 AP002414.1-201ENST00000391405 1147 ntBASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 ADH5P3-201ENST00000433842 1137 ntBASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 RN7SL204P-201ENST00000582831 262 ntBASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 AC125437.2-201ENST00000625180 2167 ntBASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.43■■□□□ 1.02
ZC3H4Q9UPT8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZC3H4Q9UPT8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZC3H4Q9UPT8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms