Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
NPIPA1Q9UND3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 AKR1C7P-201ENST00000305623 895 ntBASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA1Q9UND3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 POM121L3P-201ENST00000419331 1163 ntBASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 SAPCD2P3-201ENST00000455031 850 ntBASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 AC096582.2-201ENST00000510860 516 ntBASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 AL662844.1-201ENST00000546340 181 ntBASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 SLC25A6P4-201ENST00000586535 553 ntBASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 AL591684.3-201ENST00000605187 298 ntBASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NPIPA1Q9UND3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.43■□□□□ 0.22
NPIPA1Q9UND3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms