Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 COX5BP2-201ENST00000392354 334 ntBASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 AC073648.2-201ENST00000510116 352 ntBASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 REXO1L9P-201ENST00000604264 2108 ntBASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCF1Q9UBD9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 SART3-203ENST00000546611 1184 ntBASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AP001005.1-201ENST00000571755 1248 ntBASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AL139288.1-201ENST00000623748 933 ntBASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AC148477.8-201ENST00000624298 468 ntBASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 AC100803.2-201ENST00000562459 1963 ntBASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.8■□□□□ 0.12
CLCF1Q9UBD9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCF1Q9UBD9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms